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We argue that Transformers are essentially graph-to-graph models, with sequences just being a special case. Attention weights are functionally equivalent to graph edges. Our Graph-to-Graph Transformer architecture makes this ability…

Computation and Language · Computer Science 2023-10-30 James Henderson , Alireza Mohammadshahi , Andrei C. Coman , Lesly Miculicich

Despite the wide application of Graph Convolutional Network (GCN), one major limitation is that it does not benefit from the increasing depth and suffers from the oversmoothing problem. In this work, we first characterize this phenomenon…

Machine learning for node classification on graphs is a prominent area driven by applications such as recommendation systems. State-of-the-art models often use multiple graph convolutions on the data, as empirical evidence suggests they can…

Machine Learning · Computer Science 2024-12-17 Robert Wang , Aseem Baranwal , Kimon Fountoulakis

Recently, a considerable number of studies in computer vision involves deep neural architectures called vision transformers. Visual processing in these models incorporates computational models that are claimed to implement attention…

Computer Vision and Pattern Recognition · Computer Science 2023-03-06 Paria Mehrani , John K. Tsotsos

Self-attention, as the key block of transformers, is a powerful mechanism for extracting features from the inputs. In essence, what self-attention does is to infer the pairwise relations between the elements of the inputs, and modify the…

Machine Learning · Computer Science 2021-03-09 Lemeng Wu , Xingchao Liu , Qiang Liu

We study the capabilities of the transformer architecture with varying depth. Specifically, we designed a novel set of sequence learning tasks to systematically evaluate and comprehend how the depth of transformer affects its ability to…

Machine Learning · Computer Science 2024-04-03 Xingwu Chen , Difan Zou

Transformers are one of the most successful architectures of modern neural networks. At their core there is the so-called attention mechanism, which recently interested the physics community as it can be written as the derivative of an…

Machine Learning · Computer Science 2024-09-25 Francesco D'Amico , Matteo Negri

Graph neural networks (GNNs) is widely used to learn a powerful representation of graph-structured data. Recent work demonstrates that transferring knowledge from self-supervised tasks to downstream tasks could further improve graph…

Machine Learning · Computer Science 2021-07-21 Xueting Han , Zhenhuan Huang , Bang An , Jing Bai

Since its introduction in 2017, Transformer has emerged as the leading neural network architecture, catalyzing revolutionary advancements in many AI disciplines. The key innovation in Transformer is a Self-Attention (SA) mechanism designed…

Machine Learning · Computer Science 2024-02-05 Yueyao Yu , Yin Zhang

Advanced methods of applying deep learning to structured data such as graphs have been proposed in recent years. In particular, studies have focused on generalizing convolutional neural networks to graph data, which includes redefining the…

Machine Learning · Computer Science 2019-06-14 Junhyun Lee , Inyeop Lee , Jaewoo Kang

Transformer-based models have emerged as a leading architecture for natural language processing, natural language generation, and image generation tasks. A fundamental element of the transformer architecture is self-attention, which allows…

Machine Learning · Computer Science 2025-07-01 Venmugil Elango

Despite their empirical success, the internal mechanism by which transformer models align tokens during language processing remains poorly understood. This paper provides a mechanistic and theoretical explanation of token alignment in LLMs.…

Machine Learning · Computer Science 2025-12-19 Hadi Daneshmand

Going from pure Multilayer Perceptron (MLP) to a learnable graph message-passing mechanism at each layer has been foundational to state-of-the-art results, despite the computational trade-off (e.g. GATs or Transformers). To go a step…

Machine Learning · Computer Science 2025-12-18 Alexandre Dussolle , Pietro Liò

Graph Neural Networks (GNNs) suffer from over-smoothing in deep architectures and expressiveness bounded by the 1-Weisfeiler-Leman (1-WL) test. We adapt Manifold-Constrained Hyper-Connections (\mhc)~\citep{xie2025mhc}, recently proposed for…

Machine Learning · Computer Science 2026-01-07 Subhankar Mishra

Transformer, first applied to the field of natural language processing, is a type of deep neural network mainly based on the self-attention mechanism. Thanks to its strong representation capabilities, researchers are looking at ways to…

Computer Vision and Pattern Recognition · Computer Science 2023-07-11 Kai Han , Yunhe Wang , Hanting Chen , Xinghao Chen , Jianyuan Guo , Zhenhua Liu , Yehui Tang , An Xiao , Chunjing Xu , Yixing Xu , Zhaohui Yang , Yiman Zhang , Dacheng Tao

Message Passing Neural Networks (MPNNs) are instances of Graph Neural Networks that leverage the graph to send messages over the edges. This inductive bias leads to a phenomenon known as over-squashing, where a node feature is insensitive…

Machine Learning · Computer Science 2023-05-25 Francesco Di Giovanni , Lorenzo Giusti , Federico Barbero , Giulia Luise , Pietro Lio' , Michael Bronstein

Graph Convolutional Neural Network (GCN), a widely adopted method for analyzing relational data, enhances node discriminability through the aggregation of neighboring information. Usually, stacking multiple layers can improve the…

Machine Learning · Computer Science 2024-08-07 Furong Peng , Kang Liu , Xuan Lu , Yuhua Qian , Hongren Yan , Chao Ma

Recently, graph neural networks have attracted great attention and achieved prominent performance in various research fields. Most of those algorithms have assumed pairwise relationships of objects of interest. However, in many real…

Machine Learning · Computer Science 2020-10-13 Song Bai , Feihu Zhang , Philip H. S. Torr

In-context learning is a remarkable property of transformers and has been the focus of recent research. An attention mechanism is a key component in transformers, in which an attention matrix encodes relationships between words in a…

Machine Learning · Computer Science 2025-04-01 Katsuyuki Hagiwara

Attention mechanism has gained huge popularity due to its effectiveness in achieving high accuracy in different domains. But attention is opportunistic and is not justified by the content or usability of the content. Transformer like…

Computer Vision and Pattern Recognition · Computer Science 2020-06-26 Chiranjib Sur
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