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We study macroevolutionary dynamics by extending microevolutionary competition models to long time scales. It has been shown that for a general class of competition models, gradual evolutionary change in continuous phenotypes (evolutionary…

Populations and Evolution · Quantitative Biology 2017-02-14 Michael Doebeli , Iaroslav Ispolatov

Developmental trajectories are known to be canalized, or robust to both environmental and genetic perturbations. However, even when these trajectories are decanalized by an environmental perturbation outside of the range of conditions to…

Biological Physics · Physics 2025-09-25 Yuuki Matsushita , Archishman Raju

This paper considers the problem of learning, from samples, the dependency structure of a system of linear stochastic differential equations, when some of the variables are latent. In particular, we observe the time evolution of some…

Machine Learning · Computer Science 2012-05-02 Ali Jalali , Sujay Sanghavi

Analysis is presented of a system whose dynamics are dramatically simplified by tiny amounts of additive noise. The dynamics divide naturally into two phases. In the slower phase, trajectories are close to an invariant manifold; this allows…

adap-org · Physics 2008-02-03 G. D. Lythe

Adaptive networks change their connectivity with time, depending on their dynamical state. While synchronization in structurally static networks has been studied extensively, this problem is much more challenging for adaptive networks. In…

Adaptation and Self-Organizing Systems · Physics 2021-01-20 Rico Berner , Simon Vock , Eckehard Schöll , Serhiy Yanchuk

Robustness to mutations and noise has been shown to evolve through stabilizing selection for optimal phenotypes in model gene regulatory networks. The ability to evolve robust mutants is known to depend on the network architecture. How do…

Molecular Networks · Quantitative Biology 2008-07-07 Volkan Sevim , Per Arne Rikvold

To understand the structural dynamics of a large-scale social, biological or technological network, it may be useful to discover behavioral roles representing the main connectivity patterns present over time. In this paper, we propose a…

Social and Information Networks · Computer Science 2012-03-13 Ryan Rossi , Brian Gallagher , Jennifer Neville , Keith Henderson

People organize in groups and contagions spread across them. A simple stochastic process, yet complex to model due to dynamical correlations within and between groups. Moreover, groups can evolve if agents join or leave in response to…

Physics and Society · Physics 2025-05-22 Giulio Burgio , Guillaume St-Onge , Laurent Hébert-Dufresne

This paper addresses the problem of designing a data-driven feedback controller for complex nonlinear dynamical systems in the presence of time-varying disturbances with unknown dynamics. Such disturbances are modeled as the "unknown" part…

Systems and Control · Electrical Eng. & Systems 2023-11-22 Niyousha Rahimi , Mehran Mesbahi

We explore the coupled dynamics of the internal states of a set of interacting elements and the network of interactions among them. Interactions are modeled by a spatial game and the network of interaction links evolves adapting to the…

Other Condensed Matter · Physics 2007-09-23 Martin G. Zimmermann , Victor M. Eguiluz , Maxi San Miguel

The well-known generalization problem hinders the application of artificial neural networks in continuous-time prediction tasks with varying latent dynamics. In sharp contrast, biological systems can neatly adapt to evolving environments…

Machine Learning · Computer Science 2025-03-10 Jindou Jia , Zihan Yang , Meng Wang , Kexin Guo , Jianfei Yang , Xiang Yu , Lei Guo

This paper investigates gradient-based adaptive prediction and control for nonlinear stochastic dynamical systems under a weak convexity condition on the prediction-based loss. This condition accommodates a broad range of nonlinear models…

Systems and Control · Electrical Eng. & Systems 2026-02-13 Yujing Liu , Xin Zheng , Zhixin Liu , Lei Guo

We analyze the dynamics of a two-level system subject to driving by large-amplitude external fields, focusing on the resonance properties in the case of driving around the region of avoided level crossing. In particular, we consider three…

Quantum Physics · Physics 2009-07-17 S. Ashhab , J. R. Johansson , A. M. Zagoskin , Franco Nori

Adaptation to environmental change is a common property of biological systems. Cells initially respond to external changes in the environment, but after some time, they regain their original state. By considering an element consisting of…

Biological Physics · Physics 2015-05-13 Masayo Inoue , Kunihiko Kaneko

Stability of Wardrop equilibria is analyzed for dynamical transportation networks in which the drivers' route choices are influenced by information at multiple temporal and spatial scales. The considered model involves a continuum of…

Dynamical Systems · Mathematics 2015-03-17 Giacomo Como , Ketan Savla , Daron Acemoglu , Munther A. Dahleh , Emilio Frazzoli

Embedded systems are becoming more in demand to work in dynamic and uncertain environments, and being confined to the strong requirements of real-time. Conventional static scheduling models usually cannot cope with runtime modification in…

Systems and Control · Electrical Eng. & Systems 2026-01-08 Abdelmadjid Benmachiche , Khadija Rais , Hamda Slimi

For most stochastic dynamical systems, variables which are tightly regulated tend to respond slowly to external changes. This idea is often discussed for applicable systems, within a linear response regime, through the Fluctuation…

General Physics · Physics 2017-11-15 Nash Rochman , Sean X. Sun

State-of-the-art methods for data-driven modelling of non-linear dynamical systems typically involve interactions with an expert user. In order to partially automate the process of modelling physical systems from data, many EA-based…

Systems and Control · Computer Science 2020-05-11 Dhruv Khandelwal , Maarten Schoukens , Roland Tóth

Discrete gene regulatory networks (GRNs) play a vital role in the study of robustness and modularity. A common method of evaluating the robustness of GRNs is to measure their ability to regulate a set of perturbed gene activation patterns…

Neural and Evolutionary Computing · Computer Science 2021-12-14 Zhenyue Qin , Tom Gedeon , Bob McKay

We provide an overview of high dimensional dynamical systems driven by random matrices, focusing on applications to simple models of learning and generalization in machine learning theory. Using both cavity method arguments and path…

Disordered Systems and Neural Networks · Physics 2026-01-12 Blake Bordelon , Cengiz Pehlevan
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