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A large percentage of medical information is in unstructured text format in electronic medical record systems. Manual extraction of information from clinical notes is extremely time consuming. Natural language processing has been widely…

Information Retrieval · Computer Science 2019-08-16 Dianbo Liu , Dmitriy Dligach , Timothy Miller

Hierarchical text classification (HTC) is essential for various real applications. However, HTC models are challenging to develop because they often require processing a large volume of documents and labels with hierarchical taxonomy.…

Computation and Language · Computer Science 2023-11-08 SangHun Im , Gibaeg Kim , Heung-Seon Oh , Seongung Jo , Donghwan Kim

Clinical reasoning agents based on large language models (LLMs) aim to automate tasks such as intensive care unit (ICU) monitoring and patient state tracking from electronic health records (EHRs). Existing systems typically rely on manually…

Artificial Intelligence · Computer Science 2026-05-12 Timothy Ossowski , Xinchi Liu , Danyal Maqbool , Vaibhav Dhanuka , Sheng Zhang , Hoifung Poon , Majid Afshar , Tyler Bradshaw , Junjie Hu

Two-dimensional color codes are a promising candidate for fault-tolerant quantum computing, as they have high encoding rates, transversal implementation of logical Clifford gates, and resource-efficient magic state preparation schemes.…

Quantum Physics · Physics 2025-01-29 Seok-Hyung Lee , Andrew Li , Stephen D. Bartlett

Despite being a unique source of information on patients' status and disease progression, clinical notes are characterized by high levels of duplication and information redundancy. In general domain text, it has been shown that…

Computation and Language · Computer Science 2023-12-18 Isotta Landi , Eugenia Alleva , Alissa A. Valentine , Lauren A. Lepow , Alexander W. Charney

Language modeling have shown impressive progress in generating compelling text with good accuracy and high semantic coherence. An interesting research direction is to augment these powerful models for specific applications using contextual…

Computation and Language · Computer Science 2023-04-05 Sabri Boughorbel , Fethi Jarray , Abdulaziz Al Homaid , Rashid Niaz , Khalid Alyafei

Image-based diagnostic decision support systems (DDSS) utilizing deep learning have the potential to optimize clinical workflows. However, developing DDSS requires extensive datasets with expert annotations and is therefore costly.…

Computer Vision and Pattern Recognition · Computer Science 2024-10-29 Helen Schneider , Sebastian Nowak , Aditya Parikh , Yannik C. Layer , Maike Theis , Wolfgang Block , Alois M. Sprinkart , Ulrike Attenberger , Rafet Sifa

Objective: Clinical notes contain information not present elsewhere, including drug response and symptoms, all of which are highly important when predicting key outcomes in acute care patients. We propose the automatic annotation of…

Computation and Language · Computer Science 2021-11-25 Jingqing Zhang , Luis Bolanos , Ashwani Tanwar , Julia Ive , Vibhor Gupta , Yike Guo

Medical document understanding has gained much attention recently. One representative task is the International Classification of Disease (ICD) diagnosis code assignment. Existing work adopts either RNN or CNN as the backbone network…

Computation and Language · Computer Science 2022-04-21 Ning Zhang , Maciej Jankowski

Recent advances in large language models have led to renewed interest in natural language processing in healthcare using the free text of clinical notes. One distinguishing characteristic of clinical notes is their long time span over…

Computation and Language · Computer Science 2023-07-17 Hongyi Zheng , Yixin Zhu , Lavender Yao Jiang , Kyunghyun Cho , Eric Karl Oermann

The advent of neural audio codecs has increased in popularity due to their potential for efficiently modeling audio with transformers. Such advanced codecs represent audio from a highly continuous waveform to low-sampled discrete units. In…

Audio and Speech Processing · Electrical Eng. & Systems 2025-09-19 Samir Sadok , Julien Hauret , Éric Bavu

Accurate healthcare prediction is essential for improving patient outcomes. Existing work primarily leverages advanced frameworks like attention or graph networks to capture the intricate collaborative (CO) signals in electronic health…

Machine Learning · Computer Science 2025-04-02 Chuang Zhao , Hui Tang , Jiheng Zhang , Xiaomeng Li

Deep learning models have shown high accuracy in classifying electrocardiograms (ECGs), but their black box nature hinders clinical adoption due to a lack of trust and interpretability. To address this, we propose a novel three-stage…

Machine Learning · Computer Science 2025-12-09 Jose Geraldo Fernandes , Luiz Facury de Souza , Pedro Robles Dutenhefner , Gisele L. Pappa , Wagner Meira

Existing Clinical Decision Support Systems (CDSSs) largely depend on the availability of structured patient data and Electronic Health Records (EHRs) to aid caregivers. However, in case of hospitals in developing countries, structured…

Computation and Language · Computer Science 2019-11-27 Gokul S Krishnan , Sowmya Kamath S

Medical image denoising is considered among the most challenging vision tasks. Despite the real-world implications, existing denoising methods have notable drawbacks as they often generate visual artifacts when applied to heterogeneous…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 S M A Sharif , Rizwan Ali Naqvi , Woong-Kee Loh

Despite extensive research, time series classification and forecasting on noisy data remain highly challenging. The main difficulties lie in finding suitable mathematical concepts to describe time series and effectively separate noise from…

Machine Learning · Computer Science 2024-11-26 Chandrajit Bajaj , Minh Nguyen

We show how to learn low-dimensional representations (embeddings) of patient visits from the corresponding electronic health record (EHR) where International Classification of Diseases (ICD) diagnosis codes are removed. We expect that these…

Computers and Society · Computer Science 2018-03-28 Jean-Baptiste Escudié , Alaa Saade , Alice Coucke , Marc Lelarge

Diagnostic Captioning (DC) automatically generates a diagnostic text from one or more medical images (e.g., X-rays, MRIs) of a patient. Treated as a draft, the generated text may assist clinicians, by providing an initial estimation of the…

Artificial Intelligence · Computer Science 2024-06-21 Panagiotis Kaliosis , John Pavlopoulos , Foivos Charalampakos , Georgios Moschovis , Ion Androutsopoulos

The widespread adoption of distributed learning to train a global model from local data has been hindered by the challenge posed by stragglers. Recent attempts to mitigate this issue through gradient coding have proved difficult due to the…

Networking and Internet Architecture · Computer Science 2023-07-26 Tingting Yang , Xinghan Wang , Jiahong Ning , Yang Yang

Predicting the judgment of a legal case from its unannotated case facts is a challenging task. The lengthy and non-uniform document structure poses an even greater challenge in extracting information for decision prediction. In this work,…

Computation and Language · Computer Science 2023-11-15 Nishchal Prasad , Mohand Boughanem , Taoufiq Dkaki