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Tandem mass spectrometry (MS/MS) is a high-throughput technology used toidentify the proteins in a complex biological sample, such as a drop of blood. A collection of spectra is generated at the output of the process, each spectrum of which…

Quantitative Methods · Quantitative Biology 2019-09-06 John T. Halloran , David M. Rocke

Sparse Matrix-Matrix multiplication is a key kernel that has applications in several domains such as scientific computing and graph analysis. Several algorithms have been studied in the past for this foundational kernel. In this paper, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-10 Mehmet Deveci , Christian Trott , Sivasankaran Rajamanickam

Kernel matrices are ubiquitous in computational mathematics, often arising from applications in machine learning and scientific computing. In two or three spatial or feature dimensions, such problems can be approximated efficiently by a…

Numerical Analysis · Mathematics 2025-11-07 Abraham Khan , Chao Chen , Vishwas Rao , Arvind K. Saibaba

One of the main problems encountered so far with recurrent neural networks is that they struggle to retain long-time information dependencies in their recurrent connections. Neural Turing Machines (NTMs) attempt to mitigate this issue by…

Neural and Evolutionary Computing · Computer Science 2024-12-20 Jacopo Castellini

We study fast algorithms for computing fundamental properties of a positive semidefinite kernel matrix $K \in \mathbb{R}^{n \times n}$ corresponding to $n$ points $x_1,\ldots,x_n \in \mathbb{R}^d$. In particular, we consider estimating the…

Data Structures and Algorithms · Computer Science 2021-06-21 Arturs Backurs , Piotr Indyk , Cameron Musco , Tal Wagner

Extreme learning machine (ELM) as a neural network algorithm has shown its good performance, such as fast speed, simple structure etc, but also, weak robustness is an unavoidable defect in original ELM for blended data. We present a new…

Machine Learning · Computer Science 2014-09-24 Bo Han , Bo He , Rui Nian , Mengmeng Ma , Shujing Zhang , Minghui Li , Amaury Lendasse

Quantum machine learning (QML) is a computational paradigm that seeks to apply quantum-mechanical resources to solve learning problems. As such, the goal of this framework is to leverage quantum processors to tackle optimization,…

Quantum Physics · Physics 2025-11-21 Su Yeon Chang , M. Cerezo

Numerical software in computational science and engineering often relies on highly-optimized building blocks from libraries such as BLAS and LAPACK, and while such libraries provide portable performance for a wide range of computing…

Mathematical Software · Computer Science 2019-06-21 Daniele G. Spampinato , Diego Fabregat-Traver , Markus Püschel , Paolo Bientinesi

Machine Learning has been applied in a wide range of tasks throughout the last years, ranging from image classification to autonomous driving and natural language processing. Restricted Boltzmann Machine (RBM) has received recent attention…

Machine Learning · Computer Science 2021-01-05 Gustavo H. de Rosa , Mateus Roder , João P. Papa

General matrix-matrix multiplication (GEMM) is a fundamental operation in machine learning (ML) applications. We present the first comprehensive performance acceleration of GEMM workloads on AMD's second-generation AIE-ML (AIE2)…

Hardware Architecture · Computer Science 2025-09-01 Kaustubh Mhatre , Endri Taka , Aman Arora

State estimation is a key ingredient in most robotic systems. Often, state estimation is performed using some form of least squares minimization. Basically, all error minimization procedures that work on real-world data use robust kernels…

Robotics · Computer Science 2021-02-19 Nived Chebrolu , Thomas Läbe , Olga Vysotska , Jens Behley , Cyrill Stachniss

Most existing multi-kernel clustering algorithms, such as multi-kernel K-means, often struggle with computational efficiency and robustness when faced with complex data distributions. These challenges stem from their dependence on…

Machine Learning · Computer Science 2025-08-12 Shuyin Xia , Yifan Wang , Lifeng Shen , Guoyin Wang

Sparse matrix-matrix multiplication (SpGEMM) is a critical operation in numerous fields, including scientific computing, graph analytics, and deep learning. These applications exploit the sparsity of matrices to reduce storage and…

Machine Learning · Computer Science 2024-08-30 Sanjali Yadav , Bahar Asgari

Transformers have revolutionized deep learning with applications in natural language processing, computer vision, and beyond. However, their computational demands make it challenging to deploy them on low-power edge devices. This paper…

Hardware Architecture · Computer Science 2025-07-18 Rohit Prasad

Machine Learning (ML) has widely been used for modeling and predicting physical systems. These techniques offer high expressive power and good generalizability for interpolation within observed data sets. However, the disadvantage of…

Machine Learning · Statistics 2023-03-02 Omid Sedehi , Antonina M. Kosikova , Costas Papadimitriou , Lambros S. Katafygiotis

We present a new paradigm for speeding up randomized computations of several frequently used functions in machine learning. In particular, our paradigm can be applied for improving computations of kernels based on random embeddings. Above…

Machine Learning · Statistics 2016-04-26 Krzysztof Choromanski , Francois Fagan

Quantum kernels quantify similarity between data points by measuring the inner product between quantum states, computed through quantum circuit measurements. By embedding data into quantum systems, quantum kernel feature maps, that may be…

Quantum Physics · Physics 2025-03-24 Joachim Tomasi , Sandrine Anthoine , Hachem Kadri

The GMM (generalized min-max) kernel was recently proposed (Li, 2016) as a measure of data similarity and was demonstrated effective in machine learning tasks. In order to use the GMM kernel for large-scale datasets, the prior work resorted…

Machine Learning · Statistics 2016-07-13 Ping Li

Convolutional neural networks (CNNs) have emerged as one of the most successful machine learning technologies for image and video processing. The most computationally intensive parts of CNNs are the convolutional layers, which convolve…

Computer Vision and Pattern Recognition · Computer Science 2017-07-04 Aravind Vasudevan , Andrew Anderson , David Gregg

Motivation: In a predictive modeling setting, if sufficient details of the system behavior are known, one can build and use a simulation for making predictions. When sufficient system details are not known, one typically turns to machine…

Machine Learning · Statistics 2019-08-14 Timo M. Deist , Andrew Patti , Zhaoqi Wang , David Krane , Taylor Sorenson , David Craft
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