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Reasoning over structured graphs remains a fundamental challenge for Large Language Models (LLMs), particularly when scaling to large graphs. Existing approaches typically follow the retrieval-augmented generation (RAG) paradigm: first…

Information Retrieval · Computer Science 2026-03-03 Haoyu Han , Kai Guo , Harry Shomer , Yu Wang , Yucheng Chu , Hang Li , Li Ma , Jiliang Tang

Retrieval-Augmented Generation (RAG) has significantly mitigated the hallucinations of Large Language Models (LLMs) by grounding the generation with external knowledge. Recent extensions of RAG to graph-based retrieval offer a promising…

Machine Learning · Computer Science 2025-09-23 Jialin Chen , Houyu Zhang , Seongjun Yun , Alejandro Mottini , Rex Ying , Xiang Song , Vassilis N. Ioannidis , Zheng Li , Qingjun Cui

Optimization problems over dynamic networks have been extensively studied and widely used in the past decades to formulate numerous real-world problems. However, (1) traditional optimization-based approaches do not scale to large networks,…

Machine Learning · Computer Science 2023-05-17 Daniele Gammelli , James Harrison , Kaidi Yang , Marco Pavone , Filipe Rodrigues , Francisco C. Pereira

Molecular representation learning is vital for various downstream applications, including the analysis and prediction of molecular properties and side effects. While Graph Neural Networks (GNNs) have been a popular framework for modeling…

Machine Learning · Computer Science 2025-02-18 Pengcheng Jiang , Cao Xiao , Tianfan Fu , Parminder Bhatia , Taha Kass-Hout , Jimeng Sun , Jiawei Han

Graph Neural Network (GNN) research has produced strategies to modify a graph's edges using gradients from a trained GNN, with the goal of network design. However, the factors which govern gradient-based editing are understudied, obscuring…

Machine Learning · Computer Science 2023-10-27 Donald Loveland , Rajmonda Caceres

Neural networks have achieved remarkable success across various fields. However, the lack of interpretability limits their practical use, particularly in critical decision-making scenarios. Post-hoc interpretability, which provides…

Machine Learning · Computer Science 2025-11-21 Yang Ji , Ying Sun , Yuting Zhang , Zhigaoyuan Wang , Yuanxin Zhuang , Zheng Gong , Dazhong Shen , Chuan Qin , Hengshu Zhu , Hui Xiong

Effective mental health counseling is a complex, theory-driven process requiring the simultaneous integration of psychological frameworks, real-time distress signals, and strategic intervention planning. This level of clinical reasoning is…

Computation and Language · Computer Science 2026-04-30 Eliya Naomi Aharon , Meytal Grimland , Avi Segal , Loona Ben Dayan , Inbar Shenfeld , Yossi Levi Belz , Kobi Gal

Predictive coding is a message-passing framework initially developed to model information processing in the brain, and now also topic of research in machine learning due to some interesting properties. One of such properties is the natural…

Machine Learning · Computer Science 2022-12-12 Billy Byiringiro , Tommaso Salvatori , Thomas Lukasiewicz

Recently, Graph Neural Networks (GNNs) have significantly advanced the performance of machine learning tasks on graphs. However, this technological breakthrough makes people wonder: how does a GNN make such decisions, and can we trust its…

Machine Learning · Computer Science 2024-02-26 Xiaoqi Wang , Han-Wei Shen

Retrieval-augmented generation (RAG) enhances large language models by grounding outputs in retrieved knowledge. However, existing RAG methods including graph- and hypergraph-based approaches treat retrieved evidence as an unordered set,…

Computation and Language · Computer Science 2026-04-15 Keshu Wu , Chenchen Kuai , Zihao Li , Jiwan Jiang , Shiyu Shen , Shian Wang , Chan-Wei Hu , Zhengzhong Tu , Yang Zhou

With the ever-increasing use of complex machine learning models in critical applications within the finance domain, explaining the decisions of the model has become a necessity. With applications spanning from credit scoring to credit…

Machine Learning · Computer Science 2020-09-14 Aditya Lahiri , Narayanan Unny Edakunni

Graph Neural Networks (GNNs) are widely used in many modern applications, necessitating explanations for their decisions. However, the complexity of GNNs makes it difficult to explain predictions. Even though several methods have been…

Machine Learning · Computer Science 2022-11-04 Tien-Cuong Bui , Van-Duc Le , Wen-Syan Li , Sang Kyun Cha

Causal approaches to post-hoc explainability for black-box prediction models (e.g., deep neural networks trained on image pixel data) have become increasingly popular. However, existing approaches have two important shortcomings: (i) the…

Machine Learning · Computer Science 2025-08-12 Numair Sani , Daniel Malinsky , Ilya Shpitser

Hypergraph neural networks are a class of powerful models that leverage the message passing paradigm to learn over hypergraphs, a generalization of graphs well-suited to describing relational data with higher-order interactions. However,…

Machine Learning · Computer Science 2024-10-11 Shiye Su , Iulia Duta , Lucie Charlotte Magister , Pietro Liò

Urban land use inference is a critically important task that aids in city planning and policy-making. Recently, the increased use of sensor and location technologies has facilitated the collection of multi-modal mobility data, offering…

Artificial Intelligence · Computer Science 2026-05-11 Xuehao Zhai , Junqi Jiang , Adam Dejl , Antonio Rago , Fangce Guo , Francesca Toni , Aruna Sivakumar

Explaining artificial intelligence (AI) predictions is increasingly important and even imperative in many high-stakes applications where humans are the ultimate decision-makers. In this work, we propose two novel architectures of…

Computer Vision and Pattern Recognition · Computer Science 2023-09-01 Giang Nguyen , Mohammad Reza Taesiri , Anh Nguyen

We introduce a novel semi-supervised Graph Counterfactual Explainer (GCE) methodology, Dynamic GRAph Counterfactual Explainer (DyGRACE). It leverages initial knowledge about the data distribution to search for valid counterfactuals while…

Machine Learning · Computer Science 2023-08-07 Bardh Prenkaj , Mario Villaizan-Vallelado , Tobias Leemann , Gjergji Kasneci

Retrieval-Augmented Generation (RAG) has become a robust framework for enhancing Large Language Models (LLMs) with external knowledge. Recent advances in RAG have investigated graph based retrieval for intricate reasoning; however, the…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Tejas Sarnaik , Manan Shah , Ravi Hegde

Graph Neural Networks (GNNs) are a popular approach for predicting graph structured data. As GNNs tightly entangle the input graph into the neural network structure, common explainable AI approaches are not applicable. To a large extent,…

Graphical models capture relations between entities in a wide range of applications including social networks, biology, and natural language processing, among others. Graph neural networks (GNN) are neural models that operate over graphs,…

Machine Learning · Computer Science 2024-02-08 Xu Zheng , Farhad Shirani , Tianchun Wang , Shouwei Gao , Wenqian Dong , Wei Cheng , Dongsheng Luo
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