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A combinatorial cost function for hierarchical clustering was introduced by Dasgupta \cite{dasgupta2016cost}. It has been generalized by Cohen-Addad et al. \cite{cohen2019hierarchical} to a general form named admissible function. In this…

Machine Learning · Computer Science 2021-08-16 Yicheng Pan , Feng Zheng , Bingchen Fan

Topological methods have the potential of exploring data clouds without making assumptions on their the structure. Here we propose a hierarchical topological clustering algorithm that can be implemented with any distance choice. The…

Machine Learning · Computer Science 2026-02-10 Ana Carpio , Gema Duro

Biclustering, the process of simultaneously clustering the rows and columns of a data matrix, is a popular and effective tool for finding structure in a high-dimensional dataset. Many biclustering procedures appear to work well in practice,…

Methodology · Statistics 2020-06-04 Cheryl J. Flynn , Patrick O. Perry

In standard clustering problems, data points are represented by vectors, and by stacking them together, one forms a data matrix with row or column cluster structure. In this paper, we consider a class of binary matrices, arising in many…

Machine Learning · Statistics 2014-02-06 Jiaming Xu , Rui Wu , Kai Zhu , Bruce Hajek , R. Srikant , Lei Ying

We consider the analysis of high dimensional data given in the form of a matrix with columns consisting of observations and rows consisting of features. Often the data is such that the observations do not reside on a regular grid, and the…

Machine Learning · Statistics 2017-08-22 Gal Mishne , Ronen Talmon , Israel Cohen , Ronald R. Coifman , Yuval Kluger

While the majority of approaches to the characterization of complex networks has relied on measurements considering only the immediate neighborhood of each network node, valuable information about the network topological properties can be…

Statistical Mechanics · Physics 2015-06-24 Luciano da Fontoura Costa , Filipi Nascimento Silva

Datasets in the real world are often complex and to some degree hierarchical, with groups and sub-groups of data sharing common characteristics at different levels of abstraction. Understanding and uncovering the hidden structure of these…

Machine Learning · Computer Science 2023-07-10 Aurélien Decelle , Lorenzo Rosset , Beatriz Seoane

Standard approaches to tackle high-dimensional supervised classification problem often include variable selection and dimension reduction procedures. The novel methodology proposed in this paper combines clustering of variables and feature…

Statistics Theory · Mathematics 2018-11-07 Marie Chavent , Robin Genuer , Jerome Saracco

Connected acyclic graphs (trees) are data objects that hierarchically organize categories. Collections of trees arise in a diverse variety of fields, including evolutionary biology, public health, machine learning, social sciences and…

Methodology · Statistics 2025-12-01 Maria Alejandra Valdez Cabrera , Amy D Willis , Armeen Taeb

Hierarchical clustering is a recursive partitioning of a dataset into clusters at an increasingly finer granularity. Motivated by the fact that most work on hierarchical clustering was based on providing algorithms, rather than optimizing a…

Data Structures and Algorithms · Computer Science 2017-04-10 Vincent Cohen-Addad , Varun Kanade , Frederik Mallmann-Trenn , Claire Mathieu

Most of the research on clustering ensemble focuses on designing practical consistency learning algorithms.To solve the problems that the quality of base clusters varies and the low-quality base clusters have an impact on the performance of…

Machine Learning · Computer Science 2024-11-04 Jianwen Gan , Yan Chen , Peng Zhou , Liang Du

Hierarchical clustering and community detection are important problems in machine learning and complex network analysis. A common approach to identify clusters is to simply cut dendrograms at some threshold. However, single-level cuts are…

Physics and Society · Physics 2025-12-10 Louis Boucherie , Yong-Yeol Ahn , Sune Lehmann

Biclustering is a class of techniques that simultaneously clusters the rows and columns of a matrix to sort heterogeneous data into homogeneous blocks. Although many algorithms have been proposed to find biclusters, existing methods suffer…

Machine Learning · Statistics 2020-02-11 Michelle N. Ngo , Dustin S. Pluta , Alexander N. Ngo , Babak Shahbaba

Clustering is a fundamental approach to understanding data patterns, wherein the intuitive Euclidean distance space is commonly adopted. However, this is not the case for implicit cluster distributions reflected by qualitative attribute…

Machine Learning · Statistics 2026-03-05 Mingjie Zhao , Sen Feng , Yiqun Zhang , Mengke Li , Yang Lu , Yiu-ming Cheung

The problem of community detection in networks is usually formulated as finding a single partition of the network into some "correct" number of communities. We argue that it is more interpretable and in some regimes more accurate to…

As a kind of basic machine learning method, clustering algorithms group data points into different categories based on their similarity or distribution. We present a clustering algorithm by finding hyper-planes to distinguish the data…

Computer Vision and Pattern Recognition · Computer Science 2020-04-28 Luhong Diao , Jinying Gao1 , Manman Deng

This paper presents two efficient hierarchical clustering (HC) algorithms with respect to Dasgupta's cost function. For any input graph $G$ with a clear cluster-structure, our designed algorithms run in nearly-linear time in the input size…

Data Structures and Algorithms · Computer Science 2023-06-19 Steinar Laenen , Bogdan-Adrian Manghiuc , He Sun

We initiate a comprehensive experimental study of objective-based hierarchical clustering methods on massive datasets consisting of deep embedding vectors from computer vision and NLP applications. This includes a large variety of image…

Machine Learning · Computer Science 2022-06-10 Stanislav Naumov , Grigory Yaroslavtsev , Dmitrii Avdiukhin

Daily internet communication relies heavily on tree-structured graphs, embodied by popular data formats such as XML and JSON. However, many recent generative (probabilistic) models utilize neural networks to learn a probability distribution…

Machine Learning · Computer Science 2024-08-20 Milan Papež , Martin Rektoris , Tomáš Pevný , Václav Šmídl

Trees are fundamental data structure for many areas of computer science and system engineering. In this report, we show how to ensure eventual consistency of optimistically replicated trees. In optimistic replication, the different replicas…

Data Structures and Algorithms · Computer Science 2012-01-10 Stéphane Martin , Mehdi Ahmed-Nacer , Pascal Urso
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