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Biomedical knowledge graphs (KGs) hold rich information on entities such as diseases, drugs, and genes. Predicting missing links in these graphs can boost many important applications, such as drug design and repurposing. Recent work has…

Computation and Language · Computer Science 2021-09-22 Rahul Nadkarni , David Wadden , Iz Beltagy , Noah A. Smith , Hannaneh Hajishirzi , Tom Hope

Linking (aligning) biomedical concepts across diverse data sources enables various integrative analyses, but it is challenging due to the discrepancies in concept naming conventions. Various strategies have been developed to overcome this…

Information Retrieval · Computer Science 2024-05-14 Yuzhang Xie , Jiaying Lu , Joyce Ho , Fadi Nahab , Xiao Hu , Carl Yang

Existing knowledge-grounded conversation systems generate responses typically in a retrieve-then-generate manner. They require a large knowledge base and a strong knowledge retrieval component, which is time- and resource-consuming. In this…

Computation and Language · Computer Science 2023-06-28 Jiaqi Bai , Zhao Yan , Jian Yang , Xinnian Liang , Hongcheng Guo , Zhoujun Li

KEPLMs are pre-trained models that utilize external knowledge to enhance language understanding. Previous language models facilitated knowledge acquisition by incorporating knowledge-related pre-training tasks learned from relation triples…

Computation and Language · Computer Science 2024-03-19 Junbing Yan , Chengyu Wang , Taolin Zhang , Xiaofeng He , Jun Huang , Longtao Huang , Hui Xue , Wei Zhang

This paper introduces a novel, multi-source framework for the relational validation of Large Language Models (LLMs). While existing benchmarks have demonstrated LLMs' proficiency at factual recall, their ability to understand and reproduce…

Social and Information Networks · Computer Science 2026-05-22 Moses Boudourides

The number of published scholarly articles is growing at a significant rate, making scholarly knowledge organization increasingly important. Various approaches have been proposed to organize scholarly information, including describing…

Digital Libraries · Computer Science 2025-01-22 Allard Oelen , Sören Auer

We introduce the framework of "social learning" in the context of large language models (LLMs), whereby models share knowledge with each other in a privacy-aware manner using natural language. We present and evaluate two approaches for…

Machine Learning · Computer Science 2024-02-09 Amirkeivan Mohtashami , Florian Hartmann , Sian Gooding , Lukas Zilka , Matt Sharifi , Blaise Aguera y Arcas

Conceptual knowledge is fundamental to human cognition and knowledge bases. However, existing knowledge probing works only focus on evaluating factual knowledge of pre-trained language models (PLMs) and ignore conceptual knowledge. Since…

Computation and Language · Computer Science 2022-11-09 Hao Peng , Xiaozhi Wang , Shengding Hu , Hailong Jin , Lei Hou , Juanzi Li , Zhiyuan Liu , Qun Liu

As Large Language Models (LLMs) are increasingly deployed in specialized domains with continuously evolving knowledge, the need for timely and precise knowledge injection has become essential. Fine-tuning with paraphrased data is a common…

Computation and Language · Computer Science 2024-11-04 Minki Kang , Sung Ju Hwang , Gibbeum Lee , Jaewoong Cho

The increasing depth of parametric domain knowledge in large language models (LLMs) is fueling their rapid deployment in real-world applications. Understanding model vulnerabilities in high-stakes and knowledge-intensive tasks is essential…

Computation and Language · Computer Science 2024-12-02 R. Patrick Xian , Alex J. Lee , Satvik Lolla , Vincent Wang , Qiming Cui , Russell Ro , Reza Abbasi-Asl

Most language models (LMs) are trained and applied in an autoregressive left-to-right fashion, assuming that the next token only depends on the preceding ones. However, this assumption ignores the potential benefits of using the full…

Computation and Language · Computer Science 2023-03-14 Anh Nguyen , Nikos Karampatziakis , Weizhu Chen

Metadata attributes (e.g., user and product IDs from reviews) can be incorporated as additional inputs to neural-based NLP models, by modifying the architecture of the models, in order to improve their performance. Recent models however…

Computation and Language · Computer Science 2021-09-17 Reinald Kim Amplayo , Kang Min Yoo , Sang-Woo Lee

We conduct the first empirical study on using knowledge transfer to improve the generalization ability of large language models (LLMs) in software engineering tasks, which often require LLMs to generalize beyond their training data. Our…

Software Engineering · Computer Science 2023-08-10 Qing Huang , Yishun Wu , Zhenchang Xing , He Jiang , Yu Cheng , Huan Jin

Pretrained language models (PLMs) have motivated research on what kinds of knowledge these models learn. Fill-in-the-blanks problem (e.g., cloze tests) is a natural approach for gauging such knowledge. BioLAMA generates prompts for…

Computation and Language · Computer Science 2023-01-26 Zonghai Yao , Yi Cao , Zhichao Yang , Hong Yu

Large pre-trained language models have demonstrated their proficiency in storing factual knowledge within their parameters and achieving remarkable results when fine-tuned for downstream natural language processing tasks. Nonetheless, their…

Computation and Language · Computer Science 2023-09-29 Konstantinos Andriopoulos , Johan Pouwelse

Large language models (LLMs) sometimes demonstrate poor performance on knowledge-intensive tasks, commonsense reasoning is one of them. Researchers typically address these issues by retrieving related knowledge from knowledge graphs or…

Computation and Language · Computer Science 2024-10-15 Jiachun Li , Pengfei Cao , Chenhao Wang , Zhuoran Jin , Yubo Chen , Kang Liu , Xiaojian Jiang , Jiexin Xu , Jun Zhao

Large language models (LLMs) encode vast amounts of knowledge during pre-training (parametric knowledge, or PK) and can further be enhanced by incorporating contextual knowledge (CK). Can LLMs effectively integrate their internal PK with…

Computation and Language · Computer Science 2024-10-16 Sitao Cheng , Liangming Pan , Xunjian Yin , Xinyi Wang , William Yang Wang

The capabilities of large language models (LLMs) have expanded beyond natural language processing to scientific prediction tasks, including molecular property prediction. However, their effectiveness in in-context learning remains…

Modeling semantic relevance has always been a challenging and critical task in natural language processing. In recent years, with the emergence of massive amounts of annotated data, it has become feasible to train complex models, such as…

Computation and Language · Computer Science 2025-05-13 Min Li , Chun Yuan

Multilingual machine translation systems aim to make knowledge accessible across languages, yet learning effective cross-lingual representations remains challenging. These challenges are especially pronounced for low-resource languages,…

Computation and Language · Computer Science 2026-01-08 David Stap
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