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Strings are a natural representation of biological data such as DNA, RNA and protein sequences. The problem of finding a string that summarizes a set of sequences has direct application in relative compression algorithms for genome and…

Data Structures and Algorithms · Computer Science 2019-12-06 P. Mirabal , J. Abreu , D. Seco

Closing the gap between the hardware requirements of state-of-the-art convolutional neural networks and the limited resources constraining embedded applications is the next big challenge in deep learning research. The computational…

The Run Length Encoding (RLE) compression method is a long standing simple lossless compression scheme which is easy to implement and achieves a good compression on input data which contains repeating consecutive symbols. In its pure form…

Data Structures and Algorithms · Computer Science 2021-04-01 Sven Fiergolla , Petra Wolf

In scientific fields such as quantum computing, physics, chemistry, and machine learning, high dimensional data are typically represented using sparse tensors. Tensor contraction is a popular operation on tensors to exploit meaning or alter…

Data Structures and Algorithms · Computer Science 2024-10-15 Andrew Ensinger , Gabriel Kulp , Victor Agostinelli , Dennis Lyakhov , Lizhong Chen

The dictionary matching problem is to locate occurrences of any pattern among a set of patterns in a given text. Massive data sets abound and at the same time, there are many settings in which working space is extremely limited. We…

Data Structures and Algorithms · Computer Science 2013-01-29 Shoshana Marcus Dina Sokol

We study the complexity of the problem of searching for a set of patterns that separate two given sets of strings. This problem has applications in a wide variety of areas, most notably in data mining, computational biology, and in…

Computational Complexity · Computer Science 2016-12-20 Giuseppe Lancia , Luke Mathieson , Pablo Moscato

Compressed indexing enables powerful queries over massive and repetitive textual datasets using space proportional to the compressed input. While theoretical advances have led to highly efficient index structures, their practical…

Data Structures and Algorithms · Computer Science 2025-10-24 Ankith Reddy Adudodla , Dominik Kempa

Learnable embedding vector is one of the most important applications in machine learning, and is widely used in various database-related domains. However, the high dimensionality of sparse data in recommendation tasks and the huge volume of…

Machine Learning · Computer Science 2024-02-14 Hailin Zhang , Penghao Zhao , Xupeng Miao , Yingxia Shao , Zirui Liu , Tong Yang , Bin Cui

We conceptualize the process of understanding as information compression, and propose a method for ranking large language models (LLMs) based on lossless data compression. We demonstrate the equivalence of compression length under…

Artificial Intelligence · Computer Science 2024-06-21 Peijia Guo , Ziguang Li , Haibo Hu , Chao Huang , Ming Li , Rui Zhang

Several methods have been proposed for classifying long textual documents using Transformers. However, there is a lack of consensus on a benchmark to enable a fair comparison among different approaches. In this paper, we provide a…

Computation and Language · Computer Science 2022-03-23 Hyunji Hayley Park , Yogarshi Vyas , Kashif Shah

Low-rank and sparse composite approximation is a natural idea to compress Large Language Models (LLMs). However, such an idea faces two primary challenges that adversely affect the performance of existing methods. The first challenge…

Machine Learning · Computer Science 2026-02-27 Changhai Zhou , Qian Qiao , Yuhua Zhou , Yuxin Wu , Shichao Weng , Weizhong Zhang , Cheng Jin

Efficient methods for storing and querying are critical for scaling high-order n-gram language models to large corpora. We propose a language model based on compressed suffix trees, a representation that is highly compact and can be easily…

Computation and Language · Computer Science 2016-08-17 Ehsan Shareghi , Matthias Petri , Gholamreza Haffari , Trevor Cohn

We investigate the integration of word embeddings as classification features in the setting of large scale text classification. Such representations have been used in a plethora of tasks, however their application in classification…

Computation and Language · Computer Science 2016-06-22 Georgios Balikas , Massih-Reza Amini

Natural Language Processing (NLP) provides highly effective tools for interpreting and handling human language, offering a broad spectrum of applications. In this paper, we address a classic combinatorial problem -- finding graph partitions…

Social and Information Networks · Computer Science 2026-03-02 Marco D'Elia , Irene Finocchi , Maurizio Patrignani

In this work we introduce a new linear time compression algorithm, called "Re-pair for Trees", which compresses ranked ordered trees using linear straight-line context-free tree grammars. Such grammars generalize straight-line context-free…

Data Structures and Algorithms · Computer Science 2010-08-02 Markus Lohrey , Sebastian Maneth , Roy Mennicke

Information is extracted from large and sparse data sets organized as 3-mode tensors. Two methods are described, based on best rank-(2,2,2) and rank-(2,2,1) approximation of the tensor. The first method can be considered as a generalization…

Numerical Analysis · Mathematics 2021-02-09 L. Eldén , Maryam Dehghan

Deep learning models have become state of the art for natural language processing (NLP) tasks, however deploying these models in production system poses significant memory constraints. Existing compression methods are either lossy or…

Machine Learning · Computer Science 2018-11-05 Anish Acharya , Rahul Goel , Angeliki Metallinou , Inderjit Dhillon

The string-matching field has grown at a such complicated stage that various issues come into play when studying it: data structure and algorithmic design, database principles, compression techniques, architectural features, cache and…

Data Structures and Algorithms · Computer Science 2008-01-16 Paolo Ferragina

We propose a new linear-size data structure which provides a fast access to all palindromic substrings of a string or a set of strings. This structure inherits some ideas from the construction of both the suffix trie and suffix tree. Using…

Data Structures and Algorithms · Computer Science 2015-08-18 Mikhail Rubinchik , Arseny M. Shur

There have been multiple attempts to resolve various inflection matching problems in information retrieval. Stemming is a common approach to this end. Among many techniques for stemming, statistical stemming has been shown to be effective…

Information Retrieval · Computer Science 2016-06-22 Javid Dadashkarimi , Hossein Nasr Esfahani , Heshaam Faili , Azadeh Shakery