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We recently published a deep learning study on the potential of encoder-decoder networks for the segmentation of the 2D CAMUS ultrasound dataset. We propose in this abstract an extension of the evaluation criteria to anatomical assessment,…

One of the challenges in developing deep learning algorithms for medical image segmentation is the scarcity of annotated training data. To overcome this limitation, data augmentation and semi-supervised learning (SSL) methods have been…

Image and Video Processing · Electrical Eng. & Systems 2020-09-02 Bram Ruijsink , Esther Puyol-Anton , Ye Li , Wenja Bai , Eric Kerfoot , Reza Razavi , Andrew P. King

Image segmentation is a fundamental and challenging problem in computer vision with applications spanning multiple areas, such as medical imaging, remote sensing, and autonomous vehicles. Recently, convolutional neural networks (CNNs) have…

Computer Vision and Pattern Recognition · Computer Science 2020-06-24 Ali Hatamizadeh

Quality control (QC) of MR images is essential to ensure that downstream analyses such as segmentation can be performed successfully. Currently, QC is predominantly performed visually and subjectively, at significant time and operator cost.…

Image and Video Processing · Electrical Eng. & Systems 2021-09-07 Richard Shaw , Carole H. Sudre , Sebastien Ourselin , M. Jorge Cardoso , Hugh G. Pemberton

Cardiovascular magnetic resonance (CMR) is the gold standard for assessing cardiac function, but individual cardiac cycles complicate automatic temporal comparison or sub-phase analysis. Accurate cardiac keyframe detection can eliminate…

Computer Vision and Pattern Recognition · Computer Science 2025-10-08 Sven Koehler , Sarah Kaye Mueller , Jonathan Kiekenap , Gerald Greil , Tarique Hussain , Samir Sarikouch , Florian André , Norbert Frey , Sandy Engelhardt

Ultrasound scanning is essential in several medical diagnostic and therapeutic applications. It is used to visualize and analyze anatomical features and structures that influence treatment plans. However, it is both labor intensive, and its…

Computer Vision and Pattern Recognition · Computer Science 2021-06-29 Abdullah F. Al-Battal , Yan Gong , Lu Xu , Timothy Morton , Chen Du , Yifeng Bu 1 , Imanuel R Lerman , Radhika Madhavan , Truong Q. Nguyen

Segmenting anatomical structures in medical images has been successfully addressed with deep learning methods for a range of applications. However, this success is heavily dependent on the quality of the image that is being segmented. A…

Image and Video Processing · Electrical Eng. & Systems 2020-07-06 Ilkay Oksuz , James R. Clough , Bram Ruijsink , Esther Puyol Anton , Aurelien Bustin , Gastao Cruz , Claudia Prieto , Andrew P. King , Julia A. Schnabel

Cardiac magnetic resonance imaging (cMRI) is an integral part of diagnosis in many heart related diseases. Recently, deep neural networks have demonstrated successful automatic segmentation, thus alleviating the burden of time-consuming…

Image and Video Processing · Electrical Eng. & Systems 2020-11-17 Peter M. Full , Fabian Isensee , Paul F. Jäger , Klaus Maier-Hein

In medical imaging, segmentation models have known a significant improvement in the past decade and are now used daily in clinical practice. However, similar to classification models, segmentation models are affected by adversarial attacks.…

Image and Video Processing · Electrical Eng. & Systems 2023-10-06 Othmane Laousy , Alexandre Araujo , Guillaume Chassagnon , Nikos Paragios , Marie-Pierre Revel , Maria Vakalopoulou

We present an unsupervised 3D shape co-segmentation method which learns a set of deformable part templates from a shape collection. To accommodate structural variations in the collection, our network composes each shape by a selected subset…

Computer Vision and Pattern Recognition · Computer Science 2024-04-29 Zhiqin Chen , Qimin Chen , Hang Zhou , Hao Zhang

Deep learning-based cardiac segmentation has seen significant advancements over the years. Many studies have tackled the challenge of anatomically incorrect segmentation predictions by introducing auxiliary modules. These modules either…

Computer Vision and Pattern Recognition · Computer Science 2025-02-24 Zahid Ullah , Jihie Kim

Current state-of-the-art deep learning segmentation methods have not yet made a broad entrance into the clinical setting in spite of high demand for such automatic methods. One important reason is the lack of reliability caused by models…

Computer Vision and Pattern Recognition · Computer Science 2019-06-18 Jörg Sander , Bob D. de Vos , Jelmer M. Wolterink , Ivana Išgum

Delineation of the cardiac structures from 2D echocardiographic images is a common clinical task to establish a diagnosis. Over the past decades, the automation of this task has been the subject of intense research. In this paper, we…

Accurate segmentation of cardiac structures in cardiovascular magnetic resonance (CMR) images is essential for reliable diagnosis and treatment of cardiovascular diseases. However, manual segmentation remains time-consuming and suffers from…

Computer Vision and Pattern Recognition · Computer Science 2026-04-07 Ujjwal Jain

In this work, we propose a Variational Autoencoder (VAE) - Generative Adversarial Networks (GAN) model that can produce highly realistic MRI together with its pixel accurate groundtruth for the application of cine-MR image cardiac…

Image and Video Processing · Electrical Eng. & Systems 2020-05-25 Youssef Skandarani , Nathan Painchaud , Pierre-Marc Jodoin , Alain Lalande

Convolutional neural network (CNN) based segmentation methods provide an efficient and automated way for clinicians to assess the structure and function of the heart in cardiac MR images. While CNNs can generally perform the segmentation…

Automated segmentation of human cardiac magnetic resonance datasets has been steadily improving during recent years. However, these methods are not directly applicable in preclinical context due to limited datasets and lower image…

Image and Video Processing · Electrical Eng. & Systems 2021-09-10 Daniel Fernandez-Llaneza , Andrea Gondova , Harris Vince , Arijit Patra , Magdalena Zurek , Peter Konings , Patrik Kagelid , Leif Hultin

Human in-the-loop quality assurance (QA) is typically performed after medical image segmentation to ensure that the systems are performing as intended, as well as identifying and excluding outliers. By performing QA on large-scale,…

Image and Video Processing · Electrical Eng. & Systems 2019-11-14 Ho Hin Lee , Yucheng Tang , Olivia Tang , Yuchen Xu , Yunqiang Chen , Dashan Gao , Shizhong Han , Riqiang Gao , Michael R. Savona , Richard G. Abramson , Yuankai Huo , Bennett A. Landman

Population imaging studies rely upon good quality medical imagery before downstream image quantification. This study provides an automated approach to assess image quality from cardiovascular magnetic resonance (CMR) imaging at scale. We…

Image and Video Processing · Electrical Eng. & Systems 2025-10-28 Shahabedin Nabavi , Hossein Simchi , Mohsen Ebrahimi Moghaddam , Alejandro F. Frangi , Ahmad Ali Abin

Automated segmentation of anatomical structures is a crucial step in image analysis. For lung segmentation in computed tomography, a variety of approaches exist, involving sophisticated pipelines trained and validated on different datasets.…

Image and Video Processing · Electrical Eng. & Systems 2020-08-21 Johannes Hofmanninger , Florian Prayer , Jeanny Pan , Sebastian Rohrich , Helmut Prosch , Georg Langs