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Polarized Resonant Soft X-ray scattering (P-RSoXS) has emerged as a powerful synchrotron-based tool that combines principles of X-ray scattering and X-ray spectroscopy. P-RSoXS provides unique sensitivity to molecular orientation and…

AI-powered LizAI XT ensures real-time and accurate mega-structure of different clinical datasets and largely inaccessible and fragmented sources, into one comprehensive table or any designated forms, based on diseases, clinical variables,…

Computers and Society · Computer Science 2025-05-19 Trung Tin Nguyen , Salomon M. Stemmer , David R. Elmaleh

As graph analytics often involves compute-intensive operations, GPUs have been extensively used to accelerate the processing. However, in many applications such as social networks, cyber security, and fraud detection, their representative…

Data Structures and Algorithms · Computer Science 2018-06-28 Mo Sha , Yuchen Li , Bingsheng He , Kian-Lee Tan

Computational fluid dynamic simulations often produce large clusters of finite elements with non-trivial, non-convex boundaries and uneven distributions among compute nodes, posing challenges to compositing during interactive volume…

Petabytes of archival high time resolution observations have been captured with the Murchison Widefield Array. The search for Fast Radio Bursts within these using established software has been limited by its inability to scale on…

Instrumentation and Methods for Astrophysics · Physics 2026-03-05 Cristian Di Pietrantonio , Marcin Sokolowski , Christopher Harris , Daniel Price , Randall Wayth

There is a need for open-source libraries in emission tomography that (i) use modern and popular backend code to encourage community contributions and (ii) offer support for the multitude of reconstruction techniques available in recent…

This paper introduces and evaluates a freely available cellular nonlinear network simulator optimized for the effective use of GPUs, to achieve fast modelling and simulations. Its relevance is demonstrated for several applications in…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-23 Radu Dogaru , Ioana Dogaru

We introduce cuPDLPx, a further enhanced GPU-based first-order solver for linear programming. Building on the recently developed restarted Halpern PDHG for LP, cuPDLPx incorporates a number of new techniques, including a new restart…

Optimization and Control · Mathematics 2025-09-24 Haihao Lu , Zedong Peng , Jinwen Yang

The increasing size of cosmological simulations has led to the need for new visualization techniques. We focus on Smoothed Particle Hydrodynamical (SPH) simulations run with the GADGET code and describe methods for visually accessing the…

In recent years, a variety of ML architectures and techniques have seen success in producing skillful medium range weather forecasts. In particular, Vision Transformer (ViT)-based models (e.g. Pangu-Weather, FuXi) have shown strong…

Computer Vision and Pattern Recognition · Computer Science 2024-03-27 Vivek Ramavajjala

Multimodal evidence is critical in computational pathology: gigapixel whole slide images capture tumor morphology, while patient-level clinical descriptors preserve complementary context for prognosis. Integrating such heterogeneous signals…

Computer Vision and Pattern Recognition · Computer Science 2026-02-05 Chengying She , Chengwei Chen , Xinran Zhang , Ben Wang , Lizhuang Liu , Chengwei Shao , Yun Bian

HepRep is a generic, hierarchical format for description of graphics representables that can be augmented by physics information and relational properties. It was developed for high energy physics event display applications and is…

Graphics · Computer Science 2007-05-23 J. Perl , R. Giannitrapani , M. Frailis

The continually increasing volume of DNA sequence data has resulted in a growing demand for fast implementations of core algorithms. Computation of pairwise alignments between candidate haplotypes and sequencing reads using Pair-HMMs is a…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-27 Bertil Schmidt , Felix Kallenborn , Alexander Wichmann , Alejandro Chacon , Christian Hundt

Hash tables are ubiquitous. Properties such as an amortized constant time complexity for insertion and querying as well as a compact memory layout make them versatile associative data structures with manifold applications. The rapidly…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-13 Daniel Jünger , Robin Kobus , André Müller , Christian Hundt , Kai Xu , Weiguo Liu , Bertil Schmidt

In this paper we implemented the algorithm we developed in [1] called 3DPIFCM in a parallel environment by using CUDA on a GPU. In our previous work we introduced 3DPIFCM which performs segmentation of images in noisy conditions and uses…

Computer Vision and Pattern Recognition · Computer Science 2020-02-07 Arie Agranonik , Maya Herman , Mark Last

Next generation High-Energy Physics (HEP) experiments are presented with significant computational challenges, both in terms of data volume and processing power. Using compute accelerators, such as GPUs, is one of the promising ways to…

Effective Hamiltonian calculations for large quantum systems can be both analytically intractable and numerically expensive using standard techniques. In this manuscript, we present numerical techniques inspired by Nonperturbative…

GPUs are now used for a wide range of problems within HPC. However, making efficient use of the computational power available with multiple GPUs is challenging. The main challenges in achieving good performance are memory layout, affecting…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-20 Robert Clucas , Philip Blakely , Nikolaos Nikiforakis

We propose a novel neural architecture for computer vision -- WaveMix -- that is resource-efficient and yet generalizable and scalable. While using fewer trainable parameters, GPU RAM, and computations, WaveMix networks achieve comparable…

Computer Vision and Pattern Recognition · Computer Science 2024-04-02 Pranav Jeevan , Kavitha Viswanathan , Anandu A S , Amit Sethi

The expanding adoption of digital pathology has enabled the curation of large repositories of histology whole slide images (WSIs), which contain a wealth of information. Similar pathology image search offers the opportunity to comb through…

Computer Vision and Pattern Recognition · Computer Science 2021-07-30 Chengkuan Chen , Ming Y. Lu , Drew F. K. Williamson , Tiffany Y. Chen , Andrew J. Schaumberg , Faisal Mahmood