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partycls is a Python framework for cluster analysis of systems of interacting particles. By grouping particles that share similar structural or dynamical properties, partycls enables rapid and unsupervised exploration of the system's…

Computational Physics · Physics 2021-11-22 Joris Paret , Daniele Coslovich

We present the first stable release of Halotools (v0.2), a community-driven Python package designed to build and test models of the galaxy-halo connection. Halotools provides a modular platform for creating mock universes of galaxies…

We describe a new open source package for calculating properties of galaxy clusters, including NFW halo profiles with and without the effects of cluster miscentering. This pure-Python package, cluster-lensing, provides well-documented and…

Instrumentation and Methods for Astrophysics · Physics 2016-12-14 Jes Ford , Jake VanderPlas

We present MXtalTools, a flexible Python package for the data-driven modelling of molecular crystals, facilitating machine learning studies of the molecular solid state. MXtalTools comprises several classes of utilities: (1) synthesis,…

Machine Learning · Computer Science 2025-11-26 Michael Kilgour , Mark E. Tuckerman , Jutta Rogal

ClusterPyXT is a new software pipeline to generate spectral temperature, X-ray surface brightness, pressure, and density maps from X-ray observations of galaxy clusters. These data products help elucidate the physics of processes occurring…

High Energy Astrophysical Phenomena · Physics 2019-06-07 Brian Alden , Eric J. Hallman , David Rapetti , Jack O. Burns , Abhirup Datta

Spectropolarimetry, the observation of polarization and intensity as a function of wavelength, is a powerful tool in stellar astrophysics. It is particularly useful for characterizing stars and circumstellar material, and for tracing the…

Understanding the lives and interior structures of stellar objects is a fundamental objective of astrophysics. Research in this domain often relies on the visualization of astrophysical data, for instance, the results of theoretical…

Instrumentation and Methods for Astrophysics · Physics 2021-11-11 E. Laplace

We present a program tool, SimClust, designed for Monte-Carlo modeling of star clusters. It populates the available stellar isochrones with stars according to the initial mass function and distributes stars randomly following the analytical…

Astrophysics of Galaxies · Physics 2009-05-25 V. Deveikis , D. Narbutis , R. Stonkute , A. Bridzius , V. Vansevicius

AOtools is a Python package which is open-source and aimed at providing tools for adaptive optics users and researchers. We present version 1.0 which contains tools for adaptive optics processing, including analysing data in the pupil…

Instrumentation and Methods for Astrophysics · Physics 2020-01-08 M. J. Townson , O. J. D. Farley , G. Orban de Xivry , J. Osborn , A. P. Reeves

This paper describes the VARTOOLS program, which is an open-source command-line utility, written in C, for analyzing astronomical time-series data, especially light curves. The program provides a general-purpose set of tools for processing…

Instrumentation and Methods for Astrophysics · Physics 2016-05-24 Joel D. Hartman , Gáspár Á Bakos

BondGraphTools is a Python library for scripted modelling of complex multi-physics systems. In contrast to existing modelling solutions, BondGraphTools is based upon the well established bond graph methodology, provides a programming…

Systems and Control · Electrical Eng. & Systems 2019-06-27 Peter Cudmore , Peter J. Gawthrop , Michael Pan , Edmund J. Crampin

We present MASSCLEAN, a new, sophisticated and robust stellar cluster image and photometry simulation package. This visualization tool is able to create color-magnitude diagrams and standard FITS images in any of the traditional optical and…

Astrophysics · Physics 2015-05-13 Bogdan Popescu , M. M. Hanson

Spatial cluster analysis, the detection of localized patterns of similarity in geospatial data, has a wide-range of applications for scientific discovery and practical decision making. One way to detect spatial clusters is by using local…

Human-Computer Interaction · Computer Science 2024-04-10 Lee Mason , Blánaid Hicks , Jonas S. Almeida

When faced with new data, we often conduct a cluster analysis to obtain a better understanding of the data's structure and the archetypical samples present in the data. This process often includes visualization of the data, either as a way…

Applications · Statistics 2026-04-06 Justin Lin , Julia Fukuyama

PySEMTools is a Python-based library for post-processing simulation data produced with high-order hexahedral elements in the context of the spectral element method in computational fluid dynamics. It aims to minimize intermediate steps…

Computational Physics · Physics 2025-04-18 Adalberto Perez , Siavash Toosi , Tim Felle Olsen , Stefano Markidis , Philipp Schlatter

We present ClumPyLen, a Python-based simulator designed to produce realistic mock observations of strongly lensed, high-redshift, clumpy star-forming galaxies. The tool models galaxy components such as disks, bulges, and spiral arms using…

While clustering is one of the most popular methods for data mining, analysts lack adequate tools for quick, iterative clustering analysis, which is essential for hypothesis generation and data reasoning. We introduce Clustrophile, an…

Human-Computer Interaction · Computer Science 2017-10-09 Çağatay Demiralp

The Python package pylimer-tools is a comprehensive toolkit for computational studies of polymer networks, particularly bead-spring networks. The package provides functionality to generate polymer networks using Monte Carlo (MC) procedures…

Soft Condensed Matter · Physics 2025-08-18 Tim Bernhard , Fabian Schwarz , Andrei A. Gusev

We present a newly developed software package which implements a wide range of routines frequently used in Weak Gravitational Lensing (WL). With the continuously increasing size of the WL scientific community we feel that easy to use…

Cosmology and Nongalactic Astrophysics · Physics 2016-11-18 Andrea Petri

Software module clustering is an unsupervised learning method used to cluster software entities (e.g., classes, modules, or files) with similar features. The obtained clusters may be used to study, analyze, and understand the software…

Software Engineering · Computer Science 2020-12-03 Qusay I. Sarhan , Bestoun S. Ahmed , Miroslav Bures , Kamal Z. Zamli
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