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Fact verification datasets are typically constructed using crowdsourcing techniques due to the lack of text sources with veracity labels. However, the crowdsourcing process often produces undesired biases in data that cause models to learn…

Computation and Language · Computer Science 2021-10-01 Minwoo Lee , Seungpil Won , Juae Kim , Hwanhee Lee , Cheoneum Park , Kyomin Jung

Biomarker discovery is vital in advancing personalized medicine, offering insights into disease diagnosis, prognosis, and therapeutic efficacy. Traditionally, the identification and validation of biomarkers heavily depend on extensive…

Machine Learning · Computer Science 2024-09-25 Wangyang Ying , Dongjie Wang , Xuanming Hu , Ji Qiu , Jin Park , Yanjie Fu

Ever-expanding volumes of biomedical text require automated semantic annotation techniques to curate and put to best use. An established field of research seeks to link mentions in text to knowledge bases such as those included in the UMLS…

Artificial Intelligence · Computer Science 2018-11-13 Genevieve Gorrell , Xingyi Song , Angus Roberts

Current work in named entity recognition (NER) shows that data augmentation techniques can produce more robust models. However, most existing techniques focus on augmenting in-domain data in low-resource scenarios where annotated data is…

Computation and Language · Computer Science 2021-09-07 Shuguang Chen , Gustavo Aguilar , Leonardo Neves , Thamar Solorio

Data availability is a bottleneck during early stages of development of new capabilities for intelligent artificial agents. We investigate the use of text generation techniques to augment the training data of a popular commercial artificial…

Computation and Language · Computer Science 2019-10-09 Nikolaos Malandrakis , Minmin Shen , Anuj Goyal , Shuyang Gao , Abhishek Sethi , Angeliki Metallinou

Automated relation extraction (RE) from biomedical literature is critical for many downstream text mining applications in both research and real-world settings. However, most existing benchmarking datasets for bio-medical RE only focus on…

Computation and Language · Computer Science 2022-07-20 Ling Luo , Po-Ting Lai , Chih-Hsuan Wei , Cecilia N Arighi , Zhiyong Lu

Large Language Models (LLMs) demonstrate remarkable versatility in various NLP tasks but encounter distinct challenges in biomedical due to the complexities of language and data scarcity. This paper investigates LLMs application in the…

Computation and Language · Computer Science 2024-07-12 Masoud Monajatipoor , Jiaxin Yang , Joel Stremmel , Melika Emami , Fazlolah Mohaghegh , Mozhdeh Rouhsedaghat , Kai-Wei Chang

Existing text-to-image generative models reflect or even amplify societal biases ingrained in their training data. This is especially concerning for human image generation where models are biased against certain demographic groups. Existing…

Computer Vision and Pattern Recognition · Computer Science 2024-04-09 Robik Shrestha , Yang Zou , Qiuyu Chen , Zhiheng Li , Yusheng Xie , Siqi Deng

Although deep learning techniques have shown significant achievements, they frequently depend on extensive amounts of hand-labeled data and tend to perform inadequately in few-shot scenarios. The objective of this study is to devise a…

Computation and Language · Computer Science 2024-10-28 Leilei Su , Jian Chen , Yifan Peng , Cong Sun

Hypothesis generation in biomedical research has traditionally centered on uncovering hidden relationships within vast scientific literature, often using methods like Literature-Based Discovery (LBD). Despite progress, current approaches…

Computation and Language · Computer Science 2025-11-13 Fuyi Yang , Chenchen Ye , Mingyu Derek Ma , Yijia Xiao , Matthew Yang , Wei Wang

Visual recognition in a low-data regime is challenging and often prone to overfitting. To mitigate this issue, several data augmentation strategies have been proposed. However, standard transformations, e.g., rotation, cropping, and…

Computer Vision and Pattern Recognition · Computer Science 2023-11-08 Aniket Roy , Anshul Shah , Ketul Shah , Anirban Roy , Rama Chellappa

Multimodal Person Reidentification is gaining popularity in the research community due to its effectiveness compared to counter-part unimodal frameworks. However, the bottleneck for multimodal deep learning is the need for a large volume of…

Computer Vision and Pattern Recognition · Computer Science 2023-12-05 Mulham Fawakherji , Eduard Vazquez , Pasquale Giampa , Binod Bhattarai

Healthcare predictive analytics aids medical decision-making, diagnosis prediction and drug review analysis. Therefore, prediction accuracy is an important criteria which also necessitates robust predictive language models. However, the…

Computation and Language · Computer Science 2021-04-06 Ishani Mondal

Domain adaptation is an effective solution to data scarcity in low-resource scenarios. However, when applied to token-level tasks such as bioNER, domain adaptation methods often suffer from the challenging linguistic characteristics that…

Computation and Language · Computer Science 2022-11-14 Ngoc Dang Nguyen , Lan Du , Wray Buntine , Changyou Chen , Richard Beare

Biomedical image segmentation is critical for precise structure delineation and downstream analysis. Traditional methods often struggle with noisy data, while deep learning models such as U-Net have set new benchmarks in segmentation…

Computer Vision and Pattern Recognition · Computer Science 2025-11-10 Shuo Zhao , Yu Zhou , Jianxu Chen

Addressing the challenge of low-resource information extraction remains an ongoing issue due to the inherent information scarcity within limited training examples. Existing data augmentation methods, considered potential solutions, struggle…

Computation and Language · Computer Science 2024-05-15 Sijia Wang , Lifu Huang

Cross-lingual biomedical entity linking (BEL) maps mentions in any language to unique identifiers in a biomedical knowledge base (KB), supporting clinical and biomedical NLP applications. However, expert-annotated training data for BEL are…

Computation and Language · Computer Science 2026-05-28 Yi Wang , Corina Dima , Liangyu Zhong , Steffen Staab

Natural language processing models often face challenges due to limited labeled data, especially in domain specific areas, e.g., clinical trials. To overcome this, text augmentation techniques are commonly used to increases sample size by…

Computation and Language · Computer Science 2025-04-08 Charco Hui , Yalu Wen

This study is dedicated to exploring the application of prompt learning methods to advance Named Entity Recognition (NER) within the medical domain. In recent years, the emergence of large-scale models has driven significant progress in NER…

Computation and Language · Computer Science 2025-06-04 Jinzhu Yang

The availability of biomedical text data and advances in natural language processing (NLP) have made new applications in biomedical NLP possible. Language models trained or fine tuned using domain specific corpora can outperform general…

Computation and Language · Computer Science 2021-07-12 Usman Naseem , Adam G. Dunn , Matloob Khushi , Jinman Kim
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