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We propose an extension to the transformer neural network architecture for general-purpose graph learning by adding a dedicated pathway for pairwise structural information, called edge channels. The resultant framework - which we call…

Machine Learning · Computer Science 2022-06-06 Md Shamim Hussain , Mohammed J. Zaki , Dharmashankar Subramanian

We argue that Transformers are essentially graph-to-graph models, with sequences just being a special case. Attention weights are functionally equivalent to graph edges. Our Graph-to-Graph Transformer architecture makes this ability…

Computation and Language · Computer Science 2023-10-30 James Henderson , Alireza Mohammadshahi , Andrei C. Coman , Lesly Miculicich

Recently, fine-tuning large-scale pre-trained GNNs has yielded remarkable attention in adapting pre-trained GNN models for downstream graph learning tasks. One representative fine-tuning method is to exploit adapter (termed AdapterGNN)…

Machine Learning · Computer Science 2025-11-25 Bo Jiang , Weijun Zhao , Beibei Wang , Xiao Wang , Jin Tang

The "Graph pre-training and fine-tuning" paradigm has significantly improved Graph Neural Networks(GNNs) by capturing general knowledge without manual annotations for downstream tasks. However, due to the immense gap of data and tasks…

Machine Learning · Computer Science 2024-02-22 Yuchen Yan , Peiyan Zhang , Zheng Fang , Qingqing Long

In recent years, pre-training Graph Neural Networks (GNNs) through self-supervised learning on unlabeled graph data has emerged as a widely adopted paradigm in graph learning. Although the paradigm is effective for pre-training powerful GNN…

Machine Learning · Computer Science 2025-10-28 Yuhan Yang , Xingbo Fu , Jundong Li

Session-based recommendation systems suggest relevant items to users by modeling user behavior and preferences using short-term anonymous sessions. Existing methods leverage Graph Neural Networks (GNNs) that propagate and aggregate…

Information Retrieval · Computer Science 2022-01-10 Sai Mitheran , Abhinav Java , Surya Kant Sahu , Arshad Shaikh

Parameter-efficient fine-tuning (PEFT) of pre-trained language models (PLMs) has emerged as a highly successful approach, with training only a small number of parameters without sacrificing performance and becoming the de-facto learning…

Computation and Language · Computer Science 2023-10-20 Baohao Liao , Shaomu Tan , Christof Monz

Graph neural networks (GNNs) are shown to be successful in modeling applications with graph structures. However, training an accurate GNN model requires a large collection of labeled data and expressive features, which might be inaccessible…

Machine Learning · Computer Science 2019-06-03 Ziniu Hu , Changjun Fan , Ting Chen , Kai-Wei Chang , Yizhou Sun

Artificial general intelligence on graphs has shown significant advancements across various applications, yet the traditional 'Pre-train & Fine-tune' paradigm faces inefficiencies and negative transfer issues, particularly in complex and…

Machine Learning · Computer Science 2024-06-21 Chenyi Zi , Haihong Zhao , Xiangguo Sun , Yiqing Lin , Hong Cheng , Jia Li

Graph foundation models represent a transformative paradigm for learning transferable representations across diverse graph domains. Recent methods leverage large language models to unify graph and text modalities into a shared…

Machine Learning · Computer Science 2025-12-23 Heng Zhang , Tianyi Zhang , Yuling Shi , Xiaodong Gu , Yaomin Shen , Haochen You , Zijian Zhang , Yilei Yuan , Jin Huang

Graph foundation models have demonstrated remarkable adaptability across diverse downstream tasks through large-scale pretraining on graphs. However, existing implementations of the backbone model, graph transformers, are typically limited…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-21 Jun-Liang Lin , Kamesh Madduri , Mahmut Taylan Kandemir

Recently, much exertion has been paid to design graph self-supervised methods to obtain generalized pre-trained models, and adapt pre-trained models onto downstream tasks through fine-tuning. However, there exists an inherent gap between…

Machine Learning · Computer Science 2023-08-16 Yun Zhu , Jianhao Guo , Siliang Tang

Graph Neural Networks (GNNs) have demonstrated remarkable proficiency in handling a range of graph analytical tasks across various domains, such as e-commerce and social networks. Despite their versatility, GNNs face significant challenges…

Machine Learning · Computer Science 2025-01-08 Zhe-Rui Yang , Jindong Han , Chang-Dong Wang , Hao Liu

Low-rank adapters (LoRA) and their variants are popular parameter-efficient fine-tuning (PEFT) techniques that closely match full model fine-tune performance while requiring only a small number of additional parameters. These additional…

Machine Learning · Computer Science 2024-05-28 Runqian Wang , Soumya Ghosh , David Cox , Diego Antognini , Aude Oliva , Rogerio Feris , Leonid Karlinsky

Parameter-Efficient Fine-Tuning (PEFT) methods achieve performance comparable to Full Fine-Tuning (FFT) while requiring significantly fewer computing resources, making it the go-to choice for researchers. We find that although PEFT can…

Machine Learning · Computer Science 2025-05-29 Yongkang Liu , Xingle Xu , Ercong Nie , Zijing Wang , Shi Feng , Daling Wang , Qian Li , Hinrich Schütze

Adapting pre-trained foundation models for diverse downstream tasks is a core practice in artificial intelligence. However, the wide range of tasks and high computational costs make full fine-tuning impractical. To overcome this,…

Machine Learning · Computer Science 2025-06-27 Chongjie Si , Zhiyi Shi , Xuehui Wang , Yichen Xiao , Xiaokang Yang , Wei Shen

Fine-tuning large pre-trained foundation models often yields excellent downstream performance but is prohibitively expensive when updating all parameters. Parameter-efficient fine-tuning (PEFT) methods such as LoRA alleviate this by…

Machine Learning · Computer Science 2025-11-25 Yibo Zhong , Haoxiang Jiang , Lincan Li , Ryumei Nakada , Tianci Liu , Linjun Zhang , Huaxiu Yao , Haoyu Wang

Adapting pre-trained vision models using parameter-efficient fine-tuning (PEFT) remains challenging, as it aims to achieve performance comparable to full fine-tuning using a minimal number of trainable parameters. When applied to complex…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 Meng Lou , Stanley Yu , Yizhou Yu

Transfer learning has become a popular task adaptation method in the era of foundation models. However, many foundation models require large storage and computing resources, which makes off-the-shelf deployment impractical. Post-training…

Computer Vision and Pattern Recognition · Computer Science 2023-07-11 Jung Hwan Heo , Seyedarmin Azizi , Arash Fayyazi , Massoud Pedram

Adapter-tuning is a paradigm that transfers a pretrained language model to downstream tasks by adding and tuning a small number of new parameters. Previously proposed adapter architectures are all feed-forward neural networks. In this…

Computation and Language · Computer Science 2022-11-04 Hongyu Zhao , Hao Tan , Hongyuan Mei
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