Related papers: Finding Maximal Exact Matches in Graphs
A temporal graph is a sequence of graphs (called layers) over the same vertex set -- describing a graph topology which is subject to discrete changes over time. A $\Delta$-temporal matching $M$ is a set of time edges $(e,t)$ (an edge $e$…
Aligning a sequence to a walk in a labeled graph is a problem of fundamental importance to Computational Biology. For finding a walk in an arbitrary graph with $|E|$ edges that exactly matches a pattern of length $m$, a lower bound based on…
We consider the foundational problem of maintaining a $(1-\varepsilon)$-approximate maximum weight matching (MWM) in an $n$-node dynamic graph undergoing edge insertions and deletions. We provide a general reduction that reduces the problem…
We consider the well-studied problem of finding a perfect matching in $d$-regular bipartite graphs with $2n$ vertices and $m = nd$ edges. While the best-known algorithm for general bipartite graphs (due to Hopcroft and Karp) takes $O(m…
Finding all maximal $k$-plexes on networks is a fundamental research problem in graph analysis due to many important applications, such as community detection, biological graph analysis, and so on. A $k$-plex is a subgraph in which every…
Given a weighted bipartite graph $G = (L, R, E, w)$, the maximum weight matching (MWM) problem seeks to find a matching $M \subseteq E$ that maximizes the total weight $\sum_{e \in M} w(e)$. This paper presents a novel algorithm with a time…
Given a text $T$ of length $n$ and a pattern $P$ of length $m$, the string matching problem is a task to find all occurrences of $P$ in $T$. In this study, we propose an algorithm that solves this problem in $O((n + m)q)$ time considering…
An $(f,g)$-semi-matching in a bipartite graph $G=(U \cup V,E)$ is a set of edges $M \subseteq E$ such that each vertex $u\in U$ is incident with at most $f(u)$ edges of $M$, and each vertex $v\in V$ is incident with at most $g(v)$ edges of…
We study the maximum cardinality matching problem in a standard distributed setting, where the nodes $V$ of a given $n$-node network graph $G=(V,E)$ communicate over the edges $E$ in synchronous rounds. More specifically, we consider the…
We study the maximum induced matching problem on a graph g. Induced matchings correspond to independent sets in L2(g), the square of the line graph of g. The problem is NP-complete on bipartite graphs. In this work, we show that for a…
Edge-labeled graphs are widely used to describe relationships between entities in a database. Given a query subgraph that represents an example of what the user is searching for, we study the problem of efficiently searching for similar…
For a graph $G$ define the parameters $\ell(G)$ and $L(G)$ as the minimum and maximum value of $\nu(G\backslash F)$, where $F$ is a maximum matching of $G$ and $\nu(G)$ is the matching number of $G$. In this paper, we show that there is a…
We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…
Finding optimal matchings in dense graphs is of general interest and of particular importance in social, transportation and biological networks. While developing optimal solutions for various matching problems is important, the running…
String matching is the problem of finding all the occurrences of a pattern in a text. We propose improved versions of the fast family of string matching algorithms based on hashing $q$-grams. The improvement consists of considering minimal…
Let alpha(G) denote the maximum size of an independent set of vertices and mu(G) be the cardinality of a maximum matching in a graph G. A matching saturating all the vertices is perfect. If alpha(G) + mu(G) equals the number of vertices of…
Maximum bipartite matching (MBM) is a fundamental problem in combinatorial optimization with a long and rich history. A classic result of Hopcroft and Karp (1973) provides an $O(m \sqrt{n})$-time algorithm for the problem, where $n$ and $m$…
Approximate nearest neighbor (ANN) search in high-dimensional spaces is a foundational component of many modern retrieval and recommendation systems. Currently, almost all algorithms follow an $\epsilon$-Recall-Bounded principle when…
The structure of Markov equivalence classes (MECs) of causal DAGs has been studied extensively. A natural question in this regard is to algorithmically find the number of MECs with a given skeleton. Until recently, the known results for…
A matching in a graph is a set of edges no two of which share a common vertex. A matching M is an induced matching if no edge connects two edges of M. The problem of finding a maximum induced matching is known to be NP-hard in general and…