English
Related papers

Related papers: Predicting RNA Secondary Structure on Universal Qu…

200 papers

Protein folding -- the problem of predicting the spatial structure of a protein given its sequence of amino-acids -- has attracted considerable research effort in biochemistry in recent decades. In this work, we explore the potential of…

Quantum Physics · Physics 2022-04-06 Sami Boulebnane , Xavier Lucas , Agnes Meyder , Stanislaw Adaszewski , Ashley Montanaro

Quantum machine learning has the potential to enable advances in artificial intelligence, such as solving problems intractable on classical computers. Some fundamental ideas behind quantum machine learning are similar to kernel methods in…

Quantum Physics · Physics 2023-08-15 Samuel Bosch , Bobak Kiani , Rui Yang , Adrian Lupascu , Seth Lloyd

Combinatorial optimization is a promising application for near-term quantum computers, however, identifying performant algorithms suited to noisy quantum hardware remains as an important goal to potentially realizing quantum computational…

Quantum Physics · Physics 2025-04-01 Titus D. Morris , Ananth Kaushik , Martin Roetteler , Phillip C. Lotshaw

We report on a gate-based variational quantum classifier implemented with single photons and probabilistic gates, to emulate the standard quantum circuit model framework. We evaluate the expressive power of two deployable quantum neural…

Quantum Physics · Physics 2026-05-27 Solomon McKiernan , Luca Sapienza

Quantum computing is a new way of data processing based on the concept of quantum mechanics. Quantum circuit design is a process of converting a quantum gate to a series of basic gates and is divided into two general categories based on the…

Emerging Technologies · Computer Science 2017-03-16 Moein Sarvaghad-Moghaddam

Quantum computing is emerging as a new computing resource that could be superior to conventional computing for certain classes of optimization problems. However, in principle, most existing approaches to quantum optimization are intended to…

Optimization and Control · Mathematics 2022-01-21 Chin-Yao Chang , Eric Jones , Yiyun Yao , Peter Graf , Rishabh Jain

We propose a gate-based Quantum Genetic Algorithm (QGA) for real-valued global optimization. In this model, individuals are represented by quantum circuits whose measurement outcomes are decoded into real-valued vectors through binary…

Quantum Physics · Physics 2025-11-10 Leandro C. Souza , Laurent E. Dardenne , Renato Portugal

The limited connectivity of current and next-generation quantum annealers motivates the need for efficient graph-minor embedding methods. These methods allow non-native problems to be adapted to the target annealer's architecture. The…

Discrete Mathematics · Computer Science 2016-07-12 Arman Zaribafiyan , Dominic J. J. Marchand , Seyed Saeed Changiz Rezaei

Resource scheduling is critical in many industries, especially in power systems. The Unit Commitment problem determines the on/off status and output levels of generators under many constraints. Traditional exact methods, such as…

Systems and Control · Electrical Eng. & Systems 2025-11-04 Tyler Christeson , Md Habib Ullah , Ali Arabnya , Amin Khodaei , Rui Fan

We introduce two quantum algorithms for solving structured prediction problems. We first show that a stochastic gradient descent that uses the quantum minimum finding algorithm and takes its probabilistic failure into account solves the…

Machine Learning · Computer Science 2021-07-05 Behrooz Sepehry , Ehsan Iranmanesh , Michael P. Friedlander , Pooya Ronagh

Accurate prediction of protein active-site structures remains a central challenge in structural biology, particularly for short and flexible peptide fragments where conventional and simulation-based methods often fail. Here, we present a…

Any quantum program on a realistic quantum device must be compiled into an executable form while taking into account the underlying hardware constraints. Stringent restrictions on architecture and control imposed by physical platforms make…

Quantum Physics · Physics 2023-10-16 Run-Hong He , Xu-Sheng Xu , Mark S. Byrd , Zhao-Ming Wang

Molecular docking is an important tool for structure-based drug design, accelerating the efficiency of drug development. Complex and dynamic binding processes between proteins and small molecules require searching and sampling over a wide…

Chemical Physics · Physics 2024-02-23 Runqiu Shu , Bowen Liu , Zhaoping Xiong , Xiaopeng Cui , Yunting Li , Wei Cui , Man-Hong Yung , Nan Qiao

Although quantum computing hardware has evolved significantly in recent years, spurred by increasing industrial and government interest, the size limitation of current generation quantum computers remains an obstacle when applying these…

Quantum Physics · Physics 2020-01-20 Gideon Bass , Max Henderson , Joshua Heath , Joseph Dulny

The primary structure of a ribonucleic acid (RNA) molecule can be represented as a sequence of nucleotides (bases) over the alphabet {A, C, G, U}. The secondary or tertiary structure of an RNA is a set of base pairs which form bonds between…

Data Structures and Algorithms · Computer Science 2015-01-05 Shihyen Chen , Zhuozhi Wang , Kaizhong Zhang

Near-term quantum computers are primarily limited by errors in quantum operations (or gates) between two quantum bits (or qubits). A physical machine typically provides a set of basis gates that include primitive 2-qubit (2Q) and 1-qubit…

Quantum computing promises to solve previously intractable problems, with neutral atoms emerging as a promising technology. Zoned neutral atom architectures allow for immense parallelism and higher coherence times by shielding idling atoms…

Quantum Physics · Physics 2026-01-15 Yannick Stade , Wan-Hsuan Lin , Jason Cong , Robert Wille

We present a new cellular data processing scheme, a hybrid of existing cellular automata (CA) and gate array architectures, which is optimized for realization at the quantum scale. For conventional computing, the CA-like external clocking…

Condensed Matter · Physics 2009-10-31 S. C. Benjamin , N. F. Johnson

For the last few years, the NASA Quantum Artificial Intelligence Laboratory (QuAIL) has been performing research to assess the potential impact of quantum computers on challenging computational problems relevant to future NASA missions. A…

Mainstream machine-learning techniques such as deep learning and probabilistic programming rely heavily on sampling from generally intractable probability distributions. There is increasing interest in the potential advantages of using…

Quantum Physics · Physics 2018-01-29 Marcello Benedetti , John Realpe-Gómez , Rupak Biswas , Alejandro Perdomo-Ortiz