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Data profiling has garnered increasing attention within the data science community, primarily focusing on structured data. In this paper, we introduce a novel framework called panacea, designed to profile known cancer target combinations in…
African penguins (Spheniscus demersus) are an endangered species. Little is known regarding their underwater hunting strategies and associated predation success rates, yet this is essential for guiding conservation. Modern bio-logging…
Entomologists, ecologists and others struggle to rapidly and accurately identify the species of bumble bees they encounter in their field work and research. The current process requires the bees to be mounted, then physically shipped to a…
Extracting single-cell information from microscopy data requires accurate instance-wise segmentations. Obtaining pixel-wise segmentations from microscopy imagery remains a challenging task, especially with the added complexity of…
Plant disease recognition has witnessed a significant improvement with deep learning in recent years. Although plant disease datasets are essential and many relevant datasets are public available, two fundamental questions exist. First, how…
As is true of many complex tasks, the work of discovering, describing, and understanding the diversity of life on Earth (viz., biological systematics and taxonomy) requires many tools. Some of this work can be accomplished as it has been…
Accurate localization of proteins from fluorescence microscopy images is challenging due to the inter-class similarities and intra-class disparities introducing grave concerns in addressing multi-class classification problems. Conventional…
One of the biggest challenges that the farmers go through is to fight insect pests during agricultural product yields. The problem can be solved easily and avoid economic losses by taking timely preventive measures. This requires…
Insects are a crucial part of our ecosystem. Sadly, in the past few decades, their numbers have worryingly decreased. In an attempt to gain a better understanding of this process and monitor the insects populations, Deep Learning may offer…
We present Eyecandies, a novel synthetic dataset for unsupervised anomaly detection and localization. Photo-realistic images of procedurally generated candies are rendered in a controlled environment under multiple lightning conditions,…
Data integration is the problem of combining multiple data groups (studies, cohorts) and/or multiple data views (variables, features). This task is becoming increasingly important in many disciplines due to the prevalence of large and…
The mixture extension of exponential family principal component analysis (EPCA) was designed to encode much more structural information about data distribution than the traditional EPCA does. For example, due to the linearity of EPCA's…
Recent advancements in deep learning have brought significant improvements to plant disease recognition. However, achieving satisfactory performance often requires high-quality training datasets, which are challenging and expensive to…
Deep phenotyping is an emerging conceptual paradigm and experimental approach that seeks to measure many aspects of phenotypes and link them to understand the underlying biology. Successful deep phenotyping has mostly been applied in…
Pistachio nut is mainly consumed as raw, salted or roasted because of its high nutritional properties and favorable taste. Pistachio nuts with shell and kernel defects, besides not being acceptable for a consumer, are also prone to insects…
The correlation between insect morphological traits and climate has been documented in physiological studies, but such studies remain limited by the time-consuming nature of the data analysis. In particular, the open source datasets often…
The 2017-th edition of the LifeCLEF plant identification challenge is an important milestone towards automated plant identification systems working at the scale of continental floras with 10.000 plant species living mainly in Europe and…
In recent years, the field of single-cell data analysis has seen a marked advancement in the development of clustering methods. Despite advancements, most of these algorithms still concentrate on analyzing the provided single-cell matrix…
In precision agriculture, the detection and recognition of insects play an essential role in the ability of crops to grow healthy and produce a high-quality yield. The current machine vision model requires a large volume of data to achieve…
We study a data-driven approach to the bee identification problem for DNA strands. The bee-identification problem, introduced by Tandon et al. (2019), requires one to identify $M$ bees, each tagged by a unique barcode, via a set of $M$…