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Clustering aims to form groups of similar data points in an unsupervised regime. Yet, clustering complex datasets containing critically intertwined shapes poses significant challenges. The prevailing clustering algorithms widely depend on…

Machine Learning · Computer Science 2025-05-08 Arghya Pratihar , Kushal Bose , Swagatam Das

We demonstrate that graphs embedded on surfaces are a powerful and practical tool to generate, characterize and simulate networks with a broad range of properties. Remarkably, the study of topologically embedded graphs is non-restrictive…

Other Condensed Matter · Physics 2015-03-19 Tomaso Aste , Ruggero Gramatica , T. Di Matteo

Unsupervised clustering, also known as natural clustering, stands for the classification of data according to their similarities. Here we study this problem from the perspective of complex networks. Mapping the description of data…

Data Analysis, Statistics and Probability · Physics 2012-08-22 Clara Granell , Sergio Gomez , Alex Arenas

The community structure of complex networks reveals both their organization and hidden relationships among their constituents. Most community detection methods currently available are not deterministic, and their results typically depend on…

Physics and Society · Physics 2012-03-29 Andrea Lancichinetti , Santo Fortunato

Community structure is of paramount importance for the understanding of complex networks. Consequently, there is a tremendous effort in order to develop efficient community detection algorithms. Unfortunately, the issue of a fair assessment…

Social and Information Networks · Computer Science 2017-11-28 Jebabli Malek , Cherifi Hocine , Cherifi Chantal , Hamouda Atef

Symmetries are ubiquitous in network systems and have profound impacts on the observable dynamics. At the most fundamental level, many synchronization patterns are induced by underlying network symmetry, and a high degree of symmetry is…

Adaptation and Self-Organizing Systems · Physics 2019-02-18 Joseph D. Hart , Yuanzhao Zhang , Rajarshi Roy , Adilson E. Motter

It is shown how to construct a clique graph in which properties of cliques of a fixed order in a given graph are represented by vertices in a weighted graph. Various definitions and motivations for these weights are given. The detection of…

Physics and Society · Physics 2011-01-04 T. S. Evans

In this paper, a new framework to study weighed networks is introduced. The idea behind this methodology is to consider that each node of the network is an agent that desires to satisfy his/her preferences in an economic sense. Moreover,…

Physics and Society · Physics 2009-11-11 Daniel O. Cajueiro

Most real-world networks are embedded in latent geometries. If a node in a network is found in the vicinity of another node in the latent geometry, the two nodes have a disproportionately high probability of being connected by a link. The…

Physics and Society · Physics 2024-06-19 Bukyoung Jhun

Rooted acyclic graphs appear naturally when the phylogenetic relationship of a set $X$ of taxa involves not only speciations but also recombination, horizontal transfer, or hybridization, that cannot be captured by trees. A variety of…

Populations and Evolution · Quantitative Biology 2022-04-29 Marc Hellmuth , David Schaller , Peter F. Stadler

The topological patterns exhibited by many real-world networks motivate the development of topology-based methods for assessing the similarity of networks. However, extracting topological structure is difficult, especially for large and…

Machine Learning · Computer Science 2022-03-15 Tananun Songdechakraiwut , Bryan M. Krause , Matthew I. Banks , Kirill V. Nourski , Barry D. Van Veen

Persistent homology is a natural tool for probing the topological characteristics of weighted graphs, essentially focusing on their $0$-dimensional homology. While this area has been substantially studied, we present a new approach to…

Algebraic Topology · Mathematics 2023-10-03 Omer Bobrowski , Primoz Skraba

With the recent popularity of graphical clustering methods, there has been an increased focus on the information between samples. We show how learning cluster structure using edge features naturally and simultaneously determines the most…

Machine Learning · Statistics 2016-05-09 Matt Barnes , Artur Dubrawski

Clustering is a fundamental property of complex networks and it is the mathematical expression of a ubiquitous phenomenon that arises in various types of self-organized networks such as biological networks, computer networks or social…

Probability · Mathematics 2015-06-30 Elisabetta Candellero , Nikolaos Fountoulakis

We offer a solution to a long-standing problem in the physics of networks, the creation of a plausible, solvable model of a network that displays clustering or transitivity -- the propensity for two neighbors of a network node also to be…

Statistical Mechanics · Physics 2009-08-13 M. E. J. Newman

The local structure of unweighted networks can be characterized by the number of times a subgraph appears in the network. The clustering coefficient, reflecting the local configuration of triangles, can be seen as a special case of this…

Statistical Mechanics · Physics 2009-11-10 J. -P. Onnela , J. Saramäki , J. Kertész , K. Kaski

Traditionally, graph quality metrics focus on readability, but recent studies show the need for metrics which are more specific to the discovery of patterns in graphs. Cluster analysis is a popular task within graph analysis, yet there is…

Data Structures and Algorithms · Computer Science 2019-08-22 Amyra Meidiana , Seok-Hee Hong , Peter Eades , Daniel Keim

In this paper, we consider a multi-agent system consisting of mobile agents with second-order dynamics. The communication network is determined by the so-called topological interaction rule: agents interact with a fixed number of their…

Optimization and Control · Mathematics 2013-11-26 Samuel Martin

In general, a similarity threshold (i.e., a vigilance parameter) for a node learning process in Adaptive Resonance Theory (ART)-based algorithms has a significant impact on clustering performance. In addition, an edge deletion threshold in…

Neural and Evolutionary Computing · Computer Science 2026-05-12 Naoki Masuyama , Takanori Takebayashi , Yusuke Nojima , Chu Kiong Loo , Hisao Ishibuchi , Stefan Wermter

The Internet is composed of routing devices connected between them and organized into independent administrative entities: the Autonomous Systems. The existence of different types of Autonomous Systems (like large connectivity providers,…

Networking and Internet Architecture · Computer Science 2016-08-08 Mariano G. Beiró , Sebastián P. Grynberg , J. Ignacio Alvarez-Hamelin