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Context. We study the benefits of using a large public neuroimaging database composed of fMRI statistic maps, in a self-taught learning framework, for improving brain decoding on new tasks. First, we leverage the NeuroVault database to…

Neural and Evolutionary Computing · Computer Science 2023-04-25 Elodie Germani , Elisa Fromont , Camille Maumet

Inferring the functional specificity of brain regions from functional Magnetic Resonance Images (fMRI) data is a challenging statistical problem. While the General Linear Model (GLM) remains the standard approach for brain mapping,…

Machine Learning · Computer Science 2012-07-17 Fabian Pedregosa , Alexandre Gramfort , Gaël Varoquaux , Bertrand Thirion , Christophe Pallier , Elodie Cauvet

Understanding how the brain encodes visual information is a central challenge in neuroscience and machine learning. A promising approach is to reconstruct visual stimuli, essentially images, from functional Magnetic Resonance Imaging (fMRI)…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Zheng Huang , Enpei Zhang , Weikang Qiu , Yinghao Cai , Carl Yang , Elynn Chen , Xiang Zhang , Rex Ying , Dawei Zhou , Yujun Yan

Previous studies have shown that it is possible to map brain activation data of subjects viewing images onto the feature representation space of not only vision models (modality-specific decoding) but also language models (cross-modal…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Mitja Nikolaus , Milad Mozafari , Nicholas Asher , Leila Reddy , Rufin VanRullen

The exploration of brain activity and its decoding from fMRI data has been a longstanding pursuit, driven by its potential applications in brain-computer interfaces, medical diagnostics, and virtual reality. Previous approaches have…

Computer Vision and Pattern Recognition · Computer Science 2023-11-02 Xuelin Qian , Yun Wang , Jingyang Huo , Jianfeng Feng , Yanwei Fu

We consider the challenges in extracting stimulus-related neural dynamics from other intrinsic processes and noise in naturalistic functional magnetic resonance imaging (fMRI). Most studies rely on inter-subject correlations (ISC) of…

Neurons and Cognition · Quantitative Biology 2021-02-23 Chee-Ming Ting , Jeremy I. Skipper , Steven L. Small , Hernando Ombao

Research efforts for visual decoding from fMRI signals have attracted considerable attention in research community. Still multi-subject fMRI decoding with one model has been considered intractable due to the drastic variations in fMRI…

Computer Vision and Pattern Recognition · Computer Science 2024-10-08 Inhwa Han , Jaayeon Lee , Jong Chul Ye

We present a sequential transfer learning framework for transformers on functional Magnetic Resonance Imaging (fMRI) data and demonstrate its significant benefits for decoding musical timbre. In the first of two phases, we pre-train our…

Quantitative Methods · Quantitative Biology 2023-05-23 Sean Paulsen , Michael Casey

With the wide adoption of functional magnetic resonance imaging (fMRI) by cognitive neuroscience researchers, large volumes of brain imaging data have been accumulated in recent years. Aggregating these data to derive scientific insights…

Applications · Statistics 2020-06-01 Ming Bo Cai , Michael Shvartsman , Anqi Wu , Hejia Zhang , Xia Zhu

The development of algorithms to accurately decode neural information has long been a research focus in the field of neuroscience. Brain decoding typically involves training machine learning models to map neural data onto a preestablished…

The human visual system is capable of processing continuous streams of visual information, but how the brain encodes and retrieves recent visual memories during continuous visual processing remains unexplored. This study investigates the…

Computation and Language · Computer Science 2024-10-01 Runze Xia , Congchi Yin , Piji Li

Functional magnetic resonance imaging (fMRI) is a neuroimaging modality that captures the blood oxygen level in a subject's brain while the subject either rests or performs a variety of functional tasks under different conditions. Given…

Computer Vision and Pattern Recognition · Computer Science 2021-01-20 Sam Nguyen , Brenda Ng , Alan D. Kaplan , Priyadip Ray

We propose a sparse-coding framework for activity recognition in ubiquitous and mobile computing that alleviates two fundamental problems of current supervised learning approaches. (i) It automatically derives a compact, sparse and…

Machine Learning · Computer Science 2014-07-24 Sourav Bhattacharya , Petteri Nurmi , Nils Hammerla , Thomas Plötz

A fundamental challenge in neuroscience is to decode mental states from brain activity. While functional magnetic resonance imaging (fMRI) offers a non-invasive approach to capture brain-wide neural dynamics with high spatial precision,…

Image and Video Processing · Electrical Eng. & Systems 2025-07-31 Yueh-Po Peng , Vincent K. M. Cheung , Li Su

Functional Magnetic Resonance Imaging (fMRI) data is a widely used kind of four-dimensional biomedical data, which requires effective compression. However, fMRI compressing poses unique challenges due to its intricate temporal dynamics, low…

Image and Video Processing · Electrical Eng. & Systems 2024-03-01 Ruoran Li , Runzhao Yang , Wenxin Xiang , Yuxiao Cheng , Tingxiong Xiao , Jinli Suo

In neuroscience, understanding inter-individual differences has recently emerged as a major challenge, for which functional magnetic resonance imaging (fMRI) has proven invaluable. For this, neuroscientists rely on basic methods such as…

Computer Vision and Pattern Recognition · Computer Science 2020-04-07 Akrem Sellami , François-Xavier Dupé , Bastien Cagna , Hachem Kadri , Stéphane Ayache , Thierry Artières , Sylvain Takerkart

The human brain possesses remarkable abilities in visual processing, including image recognition and scene summarization. Efforts have been made to understand the cognitive capacities of the visual brain, but a comprehensive understanding…

Computer Vision and Pattern Recognition · Computer Science 2023-06-21 Subhrasankar Chatterjee , Debasis Samanta

Decoding visual semantic representations from human brain activity is a significant challenge. While recent zero-shot decoding approaches have improved performance by leveraging aligned image-text datasets, they overlook a fundamental…

Neurons and Cognition · Quantitative Biology 2026-01-21 Zhengdi Zhang , Hao Zhang , Wenjun Xia

Functional magnetic resonance imaging (fMRI) is a notoriously noisy measurement of brain activity because of the large variations between individuals, signals marred by environmental differences during collection, and spatiotemporal…

Functional Magnetic Resonance Imaging (fMRI) provides dynamical access into the complex functioning of the human brain, detailing the hemodynamic activity of thousands of voxels during hundreds of sequential time points. One approach…

Neurons and Cognition · Quantitative Biology 2008-01-16 Francois G. Meyer , Greg J. Stephens