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New antibiotics are needed to battle growing antibiotic resistance, but the development process from hit, to lead, and ultimately to a useful drug, takes decades. Although progress in molecular property prediction using machine-learning…

Objective: Blood transfusions, crucial in managing anemia and coagulopathy in ICU settings, require accurate prediction for effective resource allocation and patient risk assessment. However, existing clinical decision support systems have…

In recent era prediction of enzyme class from an unknown protein is one of the challenging tasks in bioinformatics. Day to day the number of proteins is increases as result the prediction of enzyme class gives a new opportunity to…

Machine Learning · Computer Science 2019-01-21 Chhote Lal Prasad Gupta , Anand Bihari , Sudhakar Tripathi

One of the important and tedious task in agricultural practices is the detection of the disease on crops. It requires huge time as well as skilled labor. This paper proposes a smart and efficient technique for detection of crop disease…

Computer Vision and Pattern Recognition · Computer Science 2021-11-23 Pranesh Kulkarni , Atharva Karwande , Tejas Kolhe , Soham Kamble , Akshay Joshi , Medha Wyawahare

The combination of Deep Learning techniques and Raman spectroscopy shows great potential offering precise and prompt identification of pathogenic bacteria in clinical settings. However, the traditional closed-set classification approaches…

Quantitative Methods · Quantitative Biology 2023-10-24 Yaroslav Balytskyi , Nataliia Kalashnyk , Inna Hubenko , Alina Balytska , Kelly McNear

Due to increasing threats from malicious software (malware) in both number and complexity, researchers have developed approaches to automatic detection and classification of malware, instead of analyzing methods for malware files manually…

Cryptography and Security · Computer Science 2020-11-02 Ahmed Bensaoud , Nawaf Abudawaood , Jugal Kalita

Pneumonia, caused by bacteria and viruses, is a rapidly spreading viral infection with global implications. Prompt identification of infected individuals is crucial for containing its transmission. This study explores the potential of…

Image and Video Processing · Electrical Eng. & Systems 2023-08-22 M. S. Haque , M. S. Taluckder , S. B. Shawkat , M. A. Shahriyar , M. A. Sayed , C. Modak

Machine learning (ML) is poised to drive innovations in clinical microbiomics, such as in disease diagnostics and prognostics. However, the successful implementation of ML in these domains necessitates the development of reproducible,…

Genomics · Quantitative Biology 2024-12-02 Natasha K. Dudek , Mariam Chakhvadze , Saba Kobakhidze , Omar Kantidze , Yuriy Gankin

Amidst growing food production demands, early plant disease detection is essential to safeguard crops; this study proposes a visual machine learning approach for plant disease detection, harnessing RGB and NIR data collected in real-world…

Computer Vision and Pattern Recognition · Computer Science 2024-02-13 Violet Liu , Jason Chen , Ans Qureshi , Mahla Nejati

As antibiotic-resistant bacterial strains are rapidly spreading worldwide, infections caused by these strains are emerging as a global crisis causing the death of millions of people every year. Antimicrobial Peptides (AMPs) are one of the…

Recently, Antimicrobial peptides (AMPs) have been an area of interest in the researches, as the first line of defense against the bacteria. They are raising attention as an efficient way of fighting multidrug resistance. Discovering and…

Quantitative Methods · Quantitative Biology 2020-05-06 Neda Zarayeneh , Zahra Hanifeloo

We apply convolutional neural networks to identify between malaria infected and non-infected segmented cells from the thin blood smear slide images. We optimize our model to find over 95% accuracy in malaria cell detection. We also apply…

Image and Video Processing · Electrical Eng. & Systems 2022-02-22 Tahsinur Rahman Talukdar , Mohammad Jaber Hossain , Tahmid H. Talukdar

Antibiotic-resistant bacteria has posed a grave threat to public health by causing a number of nosocomial infections in hospitals. Mathematical models have been used to study the transmission of antibiotic-resistant bacteria within a…

Populations and Evolution · Quantitative Biology 2016-10-06 Xiuli Cen , Zhilan Feng , Yiqiang Zheng , Yulin Zhao

We introduce a machine learning-based method for fully automated diagnosis of sickle cell disease of poor-quality unstained images of a mobile microscope. Our method is capable of distinguishing between diseased, trait (carrier), and normal…

Computer Vision and Pattern Recognition · Computer Science 2021-03-31 Sahar A. Nasser , Debjani Paul , Suyash P. Awate

Tuberculosis (TB) is the world's deadliest infectious disease, with over 1.5 million deaths annually and 10 million new cases reported each year. The causative organism, Mycobacterium tuberculosis (Mtb) can take nearly 40 days to culture, a…

Automated red blood cell (RBC) classification on blood smear images helps hematologists to analyze RBC lab results in a reduced time and cost. However, overlapping cells can cause incorrect predicted results, and so they have to be…

Image and Video Processing · Electrical Eng. & Systems 2024-10-30 Korranat Naruenatthanaset , Thanarat H. Chalidabhongse , Duangdao Palasuwan , Nantheera Anantrasirichai , Attakorn Palasuwan

Distinguishing between swarming and swimming, the two principal forms of bacterial movement, holds significant conceptual and clinical relevance. This is because bacteria that exhibit swarming capabilities often possess unique properties…

Computer Vision and Pattern Recognition · Computer Science 2025-05-16 Yuzhu Li , Hao Li , Weijie Chen , Keelan O'Riordan , Neha Mani , Yuxuan Qi , Tairan Liu , Sridhar Mani , Aydogan Ozcan

In the field of health-care and bio-medical research, understanding the relationship between the symptoms of diseases is crucial for early diagnosis and determining hidden relationships between diseases. The study aimed to understand the…

Artificial Intelligence · Computer Science 2023-02-24 Zolzaya Dashdorj , Stanislav Grigorev , Munguntsatsral Dovdondash

The large reservoir of antibiotic resistant bacteria in raw and treated water supplies is a matter of public health concern. Currently, the National Antimicrobial Resistance Monitoring Systems, a collaborative effort of the Centers for…

Populations and Evolution · Quantitative Biology 2010-07-09 Bonita Lawrence , Anna Mummert , Charles Somerville

The Antibiotic Resistance Microbiology Dataset (ARMD) is a de-identified resource derived from electronic health records (EHR) that facilitates research in antimicrobial resistance (AMR). ARMD encompasses big data from adult patients…

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