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Leveraging medical record information in the era of big data and machine learning comes with the caveat that data must be cleaned and de-identified. Facilitating data sharing and harmonization for multi-center collaborations are…

Image and Video Processing · Electrical Eng. & Systems 2023-05-11 Adrienne Kline , Vinesh Appadurai , Yuan Luo , Sanjiv Shah

We present a visuo-tactile data-collection system that generates temporally structured, contact-rich demonstrations for imitation learning. Conventional systems often decouple the operator from contact forces, which hinders the…

Robotics · Computer Science 2026-05-12 Yeseung Kim , Nayoung Oh , Jun Park , Teetat Thamronglak , Daehyung Park

We outline the development of a general-purpose Python-based data analysis tool for OpenFOAM. Our implementation relies on the construction of OpenFOAM applications that have bindings to data analysis libraries in Python. Double precision…

Computational Physics · Physics 2021-08-13 Romit Maulik , Dimitrios Fytanidis , Bethany Lusch , Venkatram Vishwanath , Saumil Patel

We present PyOECP, a Python-based flexible open-source software for estimating and modeling the complex permittivity obtained from the open-ended coaxial probe (OECP) technique. The transformation of the measured reflection coefficient to…

Instrumentation and Detectors · Physics 2021-10-01 Tae Jun Yoon , Katie A. Maerzke , Robert P. Currier , Alp T. Findikoglu

Colonoscopy video generation delivers dynamic, information-rich data critical for diagnosing intestinal diseases, particularly in data-scarce scenarios. High-quality video generation demands temporal consistency and precise control over…

Computer Vision and Pattern Recognition · Computer Science 2026-02-27 Junhu Fu , Shuyu Liang , Wutong Li , Chen Ma , Peng Huang , Kehao Wang , Ke Chen , Shengli Lin , Pinghong Zhou , Zeju Li , Yuanyuan Wang , Yi Guo

State-of-the-art neural language models can now be used to solve ad-hoc language tasks through zero-shot prompting without the need for supervised training. This approach has gained popularity in recent years, and researchers have…

Computation and Language · Computer Science 2022-08-17 Hendrik Strobelt , Albert Webson , Victor Sanh , Benjamin Hoover , Johanna Beyer , Hanspeter Pfister , Alexander M. Rush

Hyperspectral imaging (HSI) allows researchers to study plant traits non-destructively. By capturing hundreds of narrow spectral bands per pixel, it reveals details about plant biochemistry and stress that standard cameras miss. However,…

Software Engineering · Computer Science 2026-04-15 Rishik Aggarwal , Krisha Joshi , Pappu Kumar Yadav , Jianwei Qin , Thomas F. Burks , Moon S. Kim

Numerical simulations of Einstein's field equations provide unique insights into the physics of compact objects moving at relativistic speeds, and which are driven by strong gravitational interactions. Numerical relativity has played a key…

General Relativity and Quantum Cosmology · Physics 2018-07-09 Daniel Johnson , E. A. Huerta , Roland Haas

readPTU is a python package designed to analyze time-correlated single-photon counting data. The use of the library promotes the storage of the complete time arrival information of the photons and full flexibility in post-processing data…

Data Analysis, Statistics and Probability · Physics 2019-07-24 Guillem Ballesteros , Raphael Proux , Cristian Bonato , Brian D. Gerardot

We present a convenient, all-in-one framework for the scientific analysis of fully reduced, (integral-field) spectroscopic data. The GIST pipeline (Galaxy IFU Spectroscopy Tool) is entirely written in Python3 and conducts all steps from the…

Automated debugging, long pursued in a variety of fields from software engineering to cybersecurity, requires a framework that offers the building blocks for a programmable debugging workflow. However, existing debuggers are primarily…

Software Engineering · Computer Science 2025-06-06 Gabriele Digregorio , Roberto Alessandro Bertolini , Francesco Panebianco , Mario Polino

SocialED is a comprehensive, open-source Python library designed to support social event detection (SED) tasks, integrating 19 detection algorithms and 14 diverse datasets. It provides a unified API with detailed documentation, offering…

Machine Learning · Computer Science 2024-12-19 Kun Zhang , Xiaoyan Yu , Pu Li , Hao Peng , Philip S. Yu

We propose a novel deep visual odometry (VO) method that considers global information by selecting memory and refining poses. Existing learning-based methods take the VO task as a pure tracking problem via recovering camera poses from image…

Robotics · Computer Science 2020-08-05 Fei Xue , Xin Wang , Junqiu Wang , Hongbin Zha

When modeling complex, hierarchical, and time-dynamic systems, such as biological systems, good computational tools are essential. Current tools, while powerful, often lack comprehensive frameworks for modular model composition,…

Quantitative Methods · Quantitative Biology 2025-10-17 Henrik Podéus , Gustav Magnusson , Sasan Keshmiri , Kajsa Tunedal , Nicolas Sundqvist , William Lövfors , Gunnar Cedersund

We propose a new, modular, open-source, Python-based 3D+time fMRI data simulation software, \emph{SNAKE-fMRI}, which stands for \emph{S}imulator from \emph{N}eurovascular coupling to \emph{A}cquisition of \emph{K}-space data for…

Signal Processing · Electrical Eng. & Systems 2024-10-29 Pierre-Antoine Comby , Alexandre Vignaud , Philippe Ciuciu

Python is a particularly appealing language to carry out data analysis, owing in part to its user-friendly character as well as its access to well maintained and powerful libraries like NumPy and SciPy. Still, for the purpose of analyzing…

High Energy Physics - Lattice · Physics 2024-02-01 Luis Altenkort , David Anthony Clarke , Jishnu Goswami , Hauke Sandmeyer

PySEMTools is a Python-based library for post-processing simulation data produced with high-order hexahedral elements in the context of the spectral element method in computational fluid dynamics. It aims to minimize intermediate steps…

Computational Physics · Physics 2025-04-18 Adalberto Perez , Siavash Toosi , Tim Felle Olsen , Stefano Markidis , Philipp Schlatter

With emerging non-volatile memories entering the mainstream market, several operating systems start to incorporate new changes and optimizations. One major OS support is the direct-access for files, which enables efficient access for files…

Hardware Architecture · Computer Science 2021-04-22 Mao Ye

Python's dynamic type system, while offering significant flexibility and expressiveness, poses substantial challenges for static analysis and automated tooling, particularly in unannotated or partially annotated codebases. Existing type…

Software Engineering · Computer Science 2026-04-08 Ali Aman , Muhammad Asaduzzaman , Shaowei Wang

We propose RHYME-XT, an operator-learning framework for surrogate modeling of spatiotemporal control systems governed by input-affine nonlinear partial integro-differential equations (PIDEs) with localized rhythmic behavior. RHYME-XT uses a…

Machine Learning · Computer Science 2026-03-19 Marijn Ruiter , Miguel Aguiar , Jake Rap , Karl H. Johansson , Amritam Das