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Background and Objective: Variables collected over time, or longitudinally, such as biologic measurements in electronic health records data, are not simple to summarize with a single time-point, and thus can be more holistically…

Microarrays are made it possible to simultaneously monitor the expression profiles of thousands of genes under various experimental conditions. Identification of co-expressed genes and coherent patterns is the central goal in microarray or…

Computational Engineering, Finance, and Science · Computer Science 2012-01-25 T. Chandrasekhar , K. Thangavel , E. Elayaraja

Distance-based clustering and classification are widely used in various fields to group mixed numeric and categorical data. In many algorithms, a predefined distance measurement is used to cluster data points based on their dissimilarity.…

Machine Learning · Computer Science 2024-10-14 Jesse S. Ghashti , John R. J. Thompson

Clustering is a popular form of unsupervised learning for geometric data. Unfortunately, many clustering algorithms lead to cluster assignments that are hard to explain, partially because they depend on all the features of the data in a…

Machine Learning · Computer Science 2020-09-23 Sanjoy Dasgupta , Nave Frost , Michal Moshkovitz , Cyrus Rashtchian

This report explores the application of machine learning techniques on short timeseries gene expression data. Although standard machine learning algorithms work well on longer time-series', they often fail to find meaningful insights from…

Genomics · Quantitative Biology 2021-11-17 Akankshita Dash

Convex clustering, a convex relaxation of k-means clustering and hierarchical clustering, has drawn recent attentions since it nicely addresses the instability issue of traditional nonconvex clustering methods. Although its computational…

Methodology · Statistics 2019-01-01 Binhuan Wang , Yilong Zhang , Will Wei Sun , Yixin Fang

The problem of data clustering is one of the most important in data analysis. It can be problematic when dealing with experimental data characterized by measurement uncertainties and errors. Our paper proposes a recursive scheme for…

Machine Learning · Computer Science 2024-01-12 Alicja Miniak-Górecka , Krzysztof Podlaski , Tomasz Gwizdałła

We propose a categorical approach for unsupervised variational acoustic clustering of audio data in the time-frequency domain. The consideration of a categorical distribution enforces sharper clustering even when data points strongly…

Audio and Speech Processing · Electrical Eng. & Systems 2026-01-22 Luan Vinícius Fiorio , Ivana Nikoloska , Ronald M. Aarts

Constrained clustering has gained significant attention in the field of machine learning as it can leverage prior information on a growing amount of only partially labeled data. Following recent advances in deep generative models, we…

Machine Learning · Computer Science 2022-02-02 Laura Manduchi , Kieran Chin-Cheong , Holger Michel , Sven Wellmann , Julia E. Vogt

Many measurement modalities which perform imaging by probing an object pixel-by-pixel, such as via Photoacoustic Microscopy, produce a multi-dimensional feature (typically a time-domain signal) at each pixel. In principle, the many degrees…

Computer Vision and Pattern Recognition · Computer Science 2022-08-10 Nicholas Pellegrino , Paul Fieguth , Parsin Haji Reza

We propose a new model-independent method for new physics searches called Cluster Scanning. It uses the k-means algorithm to perform clustering in the space of low-level event or jet observables, and separates potentially anomalous clusters…

High Energy Physics - Phenomenology · Physics 2024-05-22 Ivan Oleksiyuk , John Andrew Raine , Michael Krämer , Svyatoslav Voloshynovskiy , Tobias Golling

The recent framework of compressive statistical learning aims at designing tractable learning algorithms that use only a heavily compressed representation-or sketch-of massive datasets. Compressive K-Means (CKM) is such a method: it…

Machine Learning · Computer Science 2018-08-01 Vincent Schellekens , Laurent Jacques

In this paper, we compare and analyze clustering methods with missing data in health behavior research. In particular, we propose and analyze the use of compressive sensing's matrix completion along with spectral clustering to cluster…

Numerical Analysis · Mathematics 2014-04-24 Ran Zhao , Deanna Needell , Christopher Johansen , Jerry L. Grenard

Selecting an appropriate clustering method as well as an optimal number of clusters in road accident data is at times confusing and difficult. This paper analyzes shortcomings of different existing techniques applied to cluster…

We study clustering methods for binary data, first defining aggregation criteria that measure the compactness of clusters. Five new and original methods are introduced, using neighborhoods and population behavior combinatorial optimization…

Cluster analysis methods seek to partition a data set into homogeneous subgroups. It is useful in a wide variety of applications, including document processing and modern genetics. Conventional clustering methods are unsupervised, meaning…

Methodology · Statistics 2014-07-11 Eric Bair

In this paper, several two-dimensional clustering scenarios are given. In those scenarios, soft partitioning clustering algorithms (Fuzzy C-means (FCM) and Possibilistic c-means (PCM)) are applied. Afterward, VAT is used to investigate the…

Machine Learning · Computer Science 2019-05-14 Md. Abu Bakr Siddique , Rezoana Bente Arif , Mohammad Mahmudur Rahman Khan , Zahidun Ashrafi

With the development of Big data technology, data analysis has become increasingly important. Traditional clustering algorithms such as K-means are highly sensitive to the initial centroid selection and perform poorly on non-convex…

Machine Learning · Computer Science 2023-07-28 Ying Xiao , Hou-biao Li , Yu-pu Zhang

Clustering is one of the most fundamental tasks in machine learning, and the k-means clustering algorithm is perhaps one of the most widely used clustering algorithms. However, it suffers from several limitations, such as sensitivity to…

Quantum Physics · Physics 2026-04-10 Syed M. Abdullah , Alisha Baba , Muhammad Siddique , Muhammad Faryad

Traditional clustering algorithms often struggle with high-dimensional and non-uniformly distributed data, where low-density boundary samples are easily disturbed by neighboring clusters, leading to unstable and distorted clustering…

Machine Learning · Computer Science 2025-10-28 Qi Li , Jun Wang