English
Related papers

Related papers: Active thermodynamic force driven mitochondrial al…

200 papers

As the places where most of the fuel of the cell, namely ATP, is synthesized, mitochondria are crucial organelles in eukaryotic cells. The shape of the invaginations of the mitochondria inner membrane, known as cristae, has been identified…

The cytoskeletal component actomyosin is a canonical example of active matter since the powerstroke cycle locally converts chemical energy in the form of adenoside triphosphate (ATP) into mechanical work for remodelling. Observing myosin II…

Biological Physics · Physics 2024-12-05 Sami C. Al-Izzi , Sedigheh Ghanbarzadeh Nodehi , Darius V. Köster , Richard G. Morris

Adenosine 5'-triphosphate (ATP) is the nearly ubiquitous "energy currency" of living organisms, and thus is a crucial participant in the majority of enzymatic reactions. The standard models in enzyme kinetics generally ignore the temporal…

Molecular Networks · Quantitative Biology 2014-06-10 Jasmine Nirody , Padmini Rangamani

An actin filament contacting myosin molecules as a functional unit of muscle contraction induces magnetic dipoles along the filament when ATP molecules to be hydrolyzed are available there. The induced magnetic dipoles are coherent over the…

Quantum Physics · Physics 2007-05-23 Kuniyuki Hatori , Hajime Honda , Koichiro Matsuno

A model is presented from which the observed morphology of the inner mitochondrial membrane can be inferred as minimizing the system's free energy. Besides the usual energetic terms for bending, surface area, and pressure difference, our…

Soft Condensed Matter · Physics 2015-05-18 M. Ghochani , J. D. Nulton , P. Salamon , T. G. Frey , A. Rabinovitch , A. R. C. Baljon

Living organisms continuously harness energy to perform complex functions for their adaptation and survival while part of that energy is dissipated in the form of heat or chemical waste. Determining the energetic cost and the efficiency of…

Molecular Networks · Quantitative Biology 2023-08-07 Valérie Voorsluijs , Francesco Avanzini , Gianmaria Falasco , Massimiliano Esposito , Alexander Skupin

Mitochondrial adenine nucleotide (AdN) content is regulated through the Ca2+-activated, electroneutral ATP-Mg/Pi carrier (APC). The APC is a protein in the mitochondrial carrier super family that localizes to the inner mitochondrial…

Cell Behavior · Quantitative Biology 2013-04-10 Shivendra G. Tewari , Ranjan K. Dash , Daniel A. Beard , Jason N. Bazil

The synthesis of ATP, life's 'universal energy currency', is the most prevalent chemical reaction in biological systems, and is responsible for fueling nearly all cellular processes, from nerve impulse propagation to DNA synthesis. ATP…

Biological Physics · Physics 2021-04-06 Jasmine A Nirody , Itay Budin , Padmini Rangamani

Epithelia form protective barriers in multicellular organisms. To maintain homeostasis, they must be able to regenerate and heal damaged areas. This occurs through collective cell migration, during which finger-like protrusions commonly…

The emergence of a body axis is a fundamental step in the development of multicellular organisms. In simple systems such as $\textit{Hydra}$, growing evidence suggests that mechanical forces generated by collective cellular activity play a…

Soft Condensed Matter · Physics 2026-01-09 Arthur Hernandez , Cuncheng Zhu , Luca Giomi

In this work, we study in detail the distribution of stochastic forces generated by the molecular motors activity, in the actin cortex of pre-muscular cells. By combining active and passive rheology experiments, performed on the same…

Biological Physics · Physics 2019-12-10 P. Bohec , J. Tailleur , F. van Wijland , A. Richert , F. Gallet

Mechanical algesia is an important process for the preservation of living organisms, allowing potentially life-saving reflexes or decisions when given body parts are stressed. Yet, its various underlying mechanisms remain to be fully…

Biological Physics · Physics 2021-02-09 Tom Vincent-Dospital , Renaud Toussaint

Trigger waves are self-regenerating propagating fronts that emerge from the coupling of nonlinear reaction kinetics and diffusion. In cells, trigger waves coordinate large-scale processes such as mitotic entry and stress responses. Although…

Molecular Networks · Quantitative Biology 2026-03-12 Jianwei Li , Kai Meng , Xuewen Shen , Fangting Li

Mitochondria of brown adipocyte (BA) are the main intracellular sites for thermogenesis, which have been targeted for therapy to reduce obesity. However, there are long-standing critique and debates about the ability of raising cellular…

Subcellular Processes · Quantitative Biology 2018-04-16 Jian-Sheng Kang

Studies by microbiologists from the 1970s provided robust estimates for the energy supply and demand of a prokaryotic cell. The amount of ATP needed to support growth was calculated from the chemical composition of the cell and known…

Molecular Networks · Quantitative Biology 2025-03-24 William F. Martin

Neuronal function requires precise spatial organization of mitochondria to meet localized energetic demand. However, the physical constraints governing mitochondrial transport in axons remain poorly defined. Bidirectional motor-driven…

Biological Physics · Physics 2026-04-27 Patrick S. Noerr , Ahmed A. Abushawish , Gulcin Pekkurnaz , Padmini Rangamani

In this paper we report, clarify and broaden various recent efforts to complement the chemistry-centered models of force generation in muscles by mechanics-centered models. The physical mechanisms of interest can be grouped into two…

Biological Physics · Physics 2018-06-26 Matthieu Caruel , Lev Truskinovsky

Muscle uses Ca2+ as a messenger to control contraction and relies on ATP to maintain the intracellular Ca2+ homeostasis. Mitochondria are the major sub-cellular organelle of ATP production. With a negative inner membrane potential,…

Biomolecules · Quantitative Biology 2016-07-29 Jingsong Zhou , Kamal Dhakal , Jianxun Yi

Adhesion between a T cell and an antigen presenting cell is achieved by TCR-pMHC and LFA1-ICAM1 protein complexes. These segregate to form a special pattern, known as the immunological synapse (IS), consisting of a central quasi-circular…

Soft Condensed Matter · Physics 2017-10-06 Nadiv Dharan , Oded Farago

To sustain metabolism, intracellular ATP concentration must be regulated within an appropriate range. This coordination is achieved through the function of the AMP-activated protein kinase (AMPK), a cellular "fuel gauge" that is expressed…

Tissues and Organs · Quantitative Biology 2019-11-07 Benoit Viollet
‹ Prev 1 2 3 10 Next ›