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Longitudinal imaging is capable of capturing the static ana\-to\-mi\-cal structures and the dynamic changes of the morphology resulting from aging or disease progression. Self-supervised learning allows to learn new representation from…

Image and Video Processing · Electrical Eng. & Systems 2019-10-25 Antoine Rivail , Ursula Schmidt-Erfurth , Wolf-Dieter Vogl , Sebastian M. Waldstein , Sophie Riedl , Christoph Grechenig , Zhichao Wu , Hrvoje Bogunović

We present a new self-supervised pre-training of Vision Transformers for dense prediction tasks. It is based on a contrastive loss across views that compares pixel-level representations to global image representations. This strategy…

Computer Vision and Pattern Recognition · Computer Science 2022-06-08 Jaonary Rabarisoa , Valentin Belissen , Florian Chabot , Quoc-Cuong Pham

Image segmentation is a fundamental problem in medical image analysis. In recent years, deep neural networks achieve impressive performances on many medical image segmentation tasks by supervised learning on large manually annotated data.…

Computer Vision and Pattern Recognition · Computer Science 2018-01-26 Ling Zhang , Vissagan Gopalakrishnan , Le Lu , Ronald M. Summers , Joel Moss , Jianhua Yao

In this paper, we target self-supervised representation learning for zero-shot tumor segmentation. We make the following contributions: First, we advocate a zero-shot setting, where models from pre-training should be directly applicable for…

Computer Vision and Pattern Recognition · Computer Science 2021-12-22 Xiaoman Zhang , Weidi Xie , Chaoqin Huang , Yanfeng Wang , Ya Zhang , Xin Chen , Qi Tian

Analyzing the dynamic changes of cellular morphology is important for understanding the various functions and characteristics of live cells, including stem cells and metastatic cancer cells. To this end, we need to track all points on the…

Computer Vision and Pattern Recognition · Computer Science 2023-03-16 Junbong Jang , Kwonmoo Lee , Tae-Kyun Kim

Accurate single cell detection in brightfield microscopy is crucial for biological research, yet data scarcity and annotation bottlenecks limit the progress of deep learning methods. We investigate the use of unconditional models to…

Computer Vision and Pattern Recognition · Computer Science 2025-12-02 Mario de Jesus da Graca , Jörg Dahlkemper , Peer Stelldinger

Self-supervised learning (SSL) methods such as masked language modeling have shown massive performance gains by pretraining transformer models for a variety of natural language processing tasks. The follow-up research adapted similar…

Computer Vision and Pattern Recognition · Computer Science 2022-05-12 Gokul Karthik Kumar , Sahal Shaji Mullappilly , Abhishek Singh Gehlot

We propose a novel unsupervised object localization method that allows us to explain the predictions of the model by utilizing self-supervised pre-trained models without additional finetuning. Existing unsupervised and self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2023-09-11 Yeonghwan Song , Seokwoo Jang , Dina Katabi , Jeany Son

The accurate segmentation and tracking of cells in microscopy image sequences is an important task in biomedical research, e.g., for studying the development of tissues, organs or entire organisms. However, the segmentation of touching…

Computer Vision and Pattern Recognition · Computer Science 2020-12-10 Tim Scherr , Katharina Löffler , Moritz Böhland , Ralf Mikut

In this paper, we introduce a novel unsupervised network to denoise microscopy videos featured by image sequences captured by a fixed location microscopy camera. Specifically, we propose a DeepTemporal Interpolation method, leveraging a…

Image and Video Processing · Electrical Eng. & Systems 2024-04-19 Mary Aiyetigbo , Alexander Korte , Ethan Anderson , Reda Chalhoub , Peter Kalivas , Feng Luo , Nianyi Li

Automated in-vitro cell detection and counting have been a key theme for artificial and intelligent biological analysis such as biopsy, drug analysis and decease diagnosis. Along with the rapid development of microfluidics and lab-on-chip…

Computer Vision and Pattern Recognition · Computer Science 2020-01-08 Tiancheng Xia , Richard Jiang , YongQing Fu , Nanlin Jin

Deep neural networks require collecting and annotating large amounts of data to train successfully. In order to alleviate the annotation bottleneck, we propose a novel self-supervised representation learning approach for spatiotemporal…

Computer Vision and Pattern Recognition · Computer Science 2019-10-29 Alaaeldin El-Nouby , Shuangfei Zhai , Graham W. Taylor , Joshua M. Susskind

It is a challenging problem to detect and recognize targets on complex large-scene Synthetic Aperture Radar (SAR) images. Recently developed deep learning algorithms can automatically learn the intrinsic features of SAR images, but still…

Computer Vision and Pattern Recognition · Computer Science 2022-01-25 Siyan Li , Yue Xiao , Yuhang Zhang , Lei Chu , Robert C. Qiu

We introduce a new neural architecture and an unsupervised algorithm for learning invariant representations from temporal sequence of images. The system uses two groups of complex cells whose outputs are combined multiplicatively: one that…

Neural and Evolutionary Computing · Computer Science 2010-06-03 Karo Gregor , Yann LeCun

Detecting and segmenting individual cells from microscopy images is critical to various life science applications. Traditional cell segmentation tools are often ill-suited for applications in brightfield microscopy due to poor contrast and…

Image and Video Processing · Electrical Eng. & Systems 2020-05-20 Rituparna Sarkar , Suvadip Mukherjee , Elisabeth Labruyère , Jean-Christophe Olivo-Marin

We present a self-supervised approach to training convolutional neural networks for dense depth estimation from monocular endoscopy data without a priori modeling of anatomy or shading. Our method only requires sequential data from…

Computer Vision and Pattern Recognition · Computer Science 2019-04-02 Xingtong Liu , Ayushi Sinha , Mathias Unberath , Masaru Ishii , Gregory Hager , Russell H. Taylor , Austin Reiter

Self-supervision has emerged as a propitious method for visual representation learning after the recent paradigm shift from handcrafted pretext tasks to instance-similarity based approaches. Most state-of-the-art methods enforce similarity…

Computer Vision and Pattern Recognition · Computer Science 2022-10-19 Sravanti Addepalli , Kaushal Bhogale , Priyam Dey , R. Venkatesh Babu

Video object segmentation is a fundamental research problem in computer vision. Recent techniques have often applied attention mechanism to object representation learning from video sequences. However, due to temporal changes in the video…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Quang-Trung Truong , Duc Thanh Nguyen , Binh-Son Hua , Sai-Kit Yeung

Self-supervised learning of convolutional neural networks can harness large amounts of cheap unlabeled data to train powerful feature representations. As surrogate task, we jointly address ordering of visual data in the spatial and temporal…

Computer Vision and Pattern Recognition · Computer Science 2018-07-31 Uta Büchler , Biagio Brattoli , Björn Ommer

Deep learning has achieved spectacular performance in image and speech recognition and synthesis. It outperforms other machine learning algorithms in problems where large amounts of data are available. In the area of measurement technology,…

Quantitative Methods · Quantitative Biology 2019-08-20 Yueqin Li , Ata Mahjoubfar , Claire Lifan Chen , Kayvan Reza Niazi , Li Pei , Bahram Jalali