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Numerous algorithms are used for nonnegative matrix factorization under the assumption that the matrix is nearly separable. In this paper, we show how to make these algorithms efficient for data matrices that have many more rows than…

Machine Learning · Computer Science 2018-01-08 Austin R. Benson , Jason D. Lee , Bartek Rajwa , David F. Gleich

Nonnegative matrix factorization (NMF) is a known unsupervised data-reduction method. The principle of the common cause (PCC) is a basic methodological approach in probabilistic causality, which seeks an independent mixture model for the…

Machine Learning · Computer Science 2025-09-09 E. Khalafyan , A. E. Allahverdyan , A. Hovhannisyan

Dimensionality reduction and matrix factorization techniques are important and useful machine-learning techniques in many fields. Nonnegative matrix factorization (NMF) is particularly useful for spectral analysis and image processing in…

Instrumentation and Methods for Astrophysics · Physics 2016-12-20 Guangtun Zhu

In an effort to develop topic modeling methods that can be quickly applied to large data sets, we revisit the problem of maximum-likelihood estimation in topic models. It is known, at least informally, that maximum-likelihood estimation in…

Machine Learning · Statistics 2026-02-10 Peter Carbonetto , Abhishek Sarkar , Zihao Wang , Matthew Stephens

Nonnegative matrix factorization (NMF) has been successfully applied to many areas for classification and clustering. Commonly-used NMF algorithms mainly target on minimizing the $l_2$ distance or Kullback-Leibler (KL) divergence, which may…

Information Retrieval · Computer Science 2014-10-07 Le Li , Jianjun Yang , Yang Xu , Zhen Qin , Honggang Zhang

Semi-Non-negative Matrix Factorization is a technique that learns a low-dimensional representation of a dataset that lends itself to a clustering interpretation. It is possible that the mapping between this new representation and our…

Computer Vision and Pattern Recognition · Computer Science 2015-09-11 George Trigeorgis , Konstantinos Bousmalis , Stefanos Zafeiriou , Bjoern W. Schuller

Non-negative matrix factorization (NMF) has become a popular machine learning approach to many problems in text mining, speech and image processing, bio-informatics and seismic data analysis to name a few. In NMF, a matrix of non-negative…

Numerical Analysis · Computer Science 2013-03-19 Hugo Van hamme

Non-negative Matrix Factorization (NMF) is an effective algorithm for multivariate data analysis, including applications to feature selection, pattern recognition, and computer vision. Its variant, Semi-Nonnegative Matrix Factorization…

Numerical Analysis · Mathematics 2024-10-23 Anthony Rhodes , Bin Jiang , Jenny Jiang

Biological signals of interest in high-dimensional data are often masked by dominant variation shared across conditions. This variation, arising from baseline biological structure or technical effects, can prevent standard dimensionality…

Machine Learning · Computer Science 2026-02-27 Yixuan Li , Archer Y. Yang , Yue Li

The paper discusses a pooling mechanism to induce subsampling in graph structured data and introduces it as a component of a graph convolutional neural network. The pooling mechanism builds on the Non-Negative Matrix Factorization (NMF) of…

Machine Learning · Computer Science 2019-09-10 Davide Bacciu , Luigi Di Sotto

We introduce a new method based on nonnegative matrix factorization, Neural NMF, for detecting latent hierarchical structure in data. Datasets with hierarchical structure arise in a wide variety of fields, such as document classification,…

Machine Learning · Computer Science 2023-03-02 Tyler Will , Runyu Zhang , Eli Sadovnik , Mengdi Gao , Joshua Vendrow , Jamie Haddock , Denali Molitor , Deanna Needell

Non-negative Matrix Factorization (NMF) is a key kernel for unsupervised dimension reduction used in a wide range of applications, including topic modeling, recommender systems and bioinformatics. Due to the compute-intensive nature of…

Machine Learning · Computer Science 2019-04-18 Gordon E. Moon , Aravind Sukumaran-Rajam , Srinivasan Parthasarathy , P. Sadayappan

In this paper, we propose a general framework to accelerate significantly the algorithms for nonnegative matrix factorization (NMF). This framework is inspired from the extrapolation scheme used to accelerate gradient methods in convex…

Numerical Analysis · Computer Science 2020-01-14 Andersen Man Shun Ang , Nicolas Gillis

Non-negative matrix factorization (NMF) is the problem of determining two non-negative low rank factors $W$ and $H$, for the given input matrix $A$, such that $A \approx W H$. NMF is a useful tool for many applications in different domains…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-10-01 Ramakrishnan Kannan , Grey Ballard , Haesun Park

Nonnegative matrix factorization (NMF) has become a widely used tool for the analysis of high-dimensional data as it automatically extracts sparse and meaningful features from a set of nonnegative data vectors. We first illustrate this…

Machine Learning · Statistics 2014-12-10 Nicolas Gillis

Non-negative matrix factorization (NMF) is widely used for dimensionality reduction and interpretable analysis, but standard formulations are unsupervised and cannot directly exploit class labels. Existing supervised or semi-supervised…

Machine Learning · Computer Science 2025-10-14 Kenichi Satoh

In this work, we consider nonnegative matrix factorization (NMF) with a regularization that promotes small volume of the convex hull spanned by the basis matrix. We present highly efficient algorithms for three different volume…

Numerical Analysis · Computer Science 2020-01-14 M. S. Ang , Nicolas Gillis

Nonnegative matrix factorization (NMF) approximates a nonnegative matrix, $X$, by the product of two nonnegative factors, $WH$, where $W$ has $r$ columns and $H$ has $r$ rows. In this paper, we consider NMF using the component-wise L1 norm…

Machine Learning · Computer Science 2026-04-01 Giovanni Seraghiti , Kévin Dubrulle , Arnaud Vandaele , Nicolas Gillis

Non-negative matrix factorization (NMF) is widely used as a feature extraction technique for matrices with non-negative entries, such as image data, purchase histories, and other types of count data. In NMF, a non-negative matrix is…

Computation · Statistics 2026-01-01 Ryo Ohashi , Hiroyasu Abe , Fumitake Sakaori

Nonnegative matrix factorization (NMF) is one of the most frequently-used matrix factorization models in data analysis. A significant reason to the popularity of NMF is its interpretability and the `parts of whole' interpretation of its…

Machine Learning · Computer Science 2018-01-19 Sanjar Karaev , James Hook , Pauli Miettinen