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Neural networks have become an increasingly popular tool for solving many real-world problems. They are a general framework for differentiable optimization which includes many other machine learning approaches as special cases. In this…

Machine Learning · Computer Science 2019-07-22 Bruno Gavranović

A model of population growth and dispersal is considered where the spatial habitat is a lattice and reproduction occurs generationally. The resulting discrete dynamical systems exhibits velocity locking, where rational speed invasion fronts…

Dynamical Systems · Mathematics 2021-12-22 Matt Holzer , Zachary Richey , Wyatt Rush , Samuel Schmidgall

In a multiplex network, a set of nodes is connected by different types of interactions, each represented as a separate layer within the network. Multiplexes have emerged as a key instrument for modeling large-scale complex systems, due to…

Probability · Mathematics 2025-10-13 Ankan Ganguly , Bhaswar B. Bhattacharya

In this work we introduce a differential rendering module which allows neural networks to efficiently process cluttered data. The module is composed of continuous piecewise differentiable functions defined as a sensor array of cells…

Computer Vision and Pattern Recognition · Computer Science 2019-04-11 Yonatan Svirsky , Andrei Sharf

We investigate the predictive power of recurrent neural networks for oscillatory systems not only on the attractor, but in its vicinity as well. For this we consider systems perturbed by an external force. This allows us to not merely…

Adaptation and Self-Organizing Systems · Physics 2019-07-02 Rok Cestnik , Markus Abel

We systematically study the boundaries of one-dimensional, 2-color cellular automata depending on 4 cells, begun from simple initial conditions. We determine the exact growth rates of the boundaries that appear to be reducible. Morphic…

Cellular Automata and Lattice Gases · Physics 2015-03-13 Charles D. Brummitt , Eric Rowland

Deep learning techniques are increasingly being adopted for classification tasks over the past decade, yet explaining how deep learning architectures can achieve state-of-the-art performance is still an elusive goal. While all the training…

Machine Learning · Computer Science 2021-10-12 Sakib Mostafa , Debajyoti Mondal

Deep feedforward and recurrent rate-based neural networks have become successful functional models of the brain, but they neglect obvious biological details such as spikes and Dale's law. Here we argue that these details are crucial in…

Neurons and Cognition · Quantitative Biology 2023-12-29 William F. Podlaski , Christian K. Machens

Oscillatory dynamics of complex networks has recently attracted great attention. In this paper we study pattern formation in oscillatory complex networks consisting of excitable nodes. We find that there exist a few center nodes and small…

Chaotic Dynamics · Physics 2011-11-23 Liao Xuhong , Xia Qinzhi , Qian Yu , Zhang Lisheng , Hu Gang , Mi Yuanyuan

In this article we present an algorithm to compute bounds on the marginals of a graphical model. For several small clusters of nodes upper and lower bounds on the marginal values are computed independently of the rest of the network. The…

Artificial Intelligence · Computer Science 2011-06-27 B. Kappen , M. Leisink

The response time of physical computational elements is finite, and neurons are no exception. In hierarchical models of cortical networks each layer thus introduces a response lag. This inherent property of physical dynamical systems…

Neurons and Cognition · Quantitative Biology 2021-10-28 Paul Haider , Benjamin Ellenberger , Laura Kriener , Jakob Jordan , Walter Senn , Mihai A. Petrovici

Interactions between neighboring cells are essential for generating or refining patterns in a number of biological systems. We propose a discrete filtering approach to predict how networks of cells modulate spatially varying input signals…

Tissues and Organs · Quantitative Biology 2019-02-14 Melinda Liu Perkins , Murat Arcak

The spontaneous generation of electrical activity underpins a number of essential physiological processes, and is observed even in tissues where specialized pacemaker cells have not been identified. The emergence of periodic oscillations in…

Adaptation and Self-Organizing Systems · Physics 2022-02-01 Ria Ghosh , Shakti N. Menon

Neurons are the fundamental building blocks of deep neural networks, and their interconnections allow AI to achieve unprecedented results. Motivated by the goal of understanding how neurons encode information, compositional explanations…

Computer Vision and Pattern Recognition · Computer Science 2025-11-27 Biagio La Rosa , Leilani H. Gilpin

Nearly all cell models explicitly or implicitly deal with the biophysical constraints that must be respected for life to persist. Despite this, there is almost no systematicity in how these constraints are implemented, and we lack a…

Cell Behavior · Quantitative Biology 2026-05-20 Connor McShaffrey , Eran Agmon , Randall D. Beer

Compositional Explanations is a method for identifying logical formulas of concepts that approximate the neurons' behavior. However, these explanations are linked to the small spectrum of neuron activations (i.e., the highest ones) used to…

Machine Learning · Computer Science 2023-10-31 Biagio La Rosa , Leilani H. Gilpin , Roberto Capobianco

For 20 years the beautiful structure in the grid cell code has presented an attractive puzzle: what computation do these representations subserve, and why does it manifest so curiously in neurons. The first question quickly attracted an…

Neurons and Cognition · Quantitative Biology 2026-03-06 William Dorrell , James C. R. Whittington

Neural networks with rectified linear unit activations are essentially multivariate linear splines. As such, one of many ways to measure the "complexity" or "expressivity" of a neural network is to count the number of knots in the spline…

Machine Learning · Statistics 2016-12-01 Kevin K. Chen

Complex systems are often driven by higher-order interactions among multiple units, naturally represented as hypergraphs. Understanding dependency structures within these hypergraphs is crucial for understanding and predicting the behavior…

Social and Information Networks · Computer Science 2025-05-29 John Hood , Caterina De Bacco , Aaron Schein

We show how brain networks, modeled as Spiking Neural Networks, can be viewed at different levels of abstraction. Lower levels include complications such as failures of neurons and edges. Higher levels are more abstract, making simplifying…

Neural and Evolutionary Computing · Computer Science 2024-08-06 Nancy Lynch