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The field of computational modeling of the brain is advancing so rapidly that now it is possible to model large scale networks representing different brain regions with a high level of biological detail in terms of numbers and synapses. For…

Recently brain networks have been widely adopted to study brain dynamics, brain development and brain diseases. Graph representation learning techniques on brain functional networks can facilitate the discovery of novel biomarkers for…

Machine Learning · Computer Science 2022-07-19 Haoteng Tang , Guixiang Ma , Lei Guo , Xiyao Fu , Heng Huang , Liang Zhang

Higher-order connectivity patterns such as small induced sub-graphs called graphlets (network motifs) are vital to understand the important components (modules/functional units) governing the configuration and behavior of complex networks.…

Social and Information Networks · Computer Science 2020-09-15 Aldo G. Carranza , Ryan A. Rossi , Anup Rao , Eunyee Koh

A classification of critical behavior is provided in systems for which the renormalization group equations are control-parameter dependent. It describes phase transitions in networks with a recursive, hierarchical structure but appears to…

Statistical Mechanics · Physics 2015-05-12 Stefan Boettcher , Trent Brunson

We take an image science perspective on the problem of determining brain network connectivity given functional activity. But adapting the concept of image resolution to this problem, we provide a new perspective on network partitioning for…

Neurons and Cognition · Quantitative Biology 2020-02-14 Keith Dillon , Yu-Ping Wang

The community structure of complex networks reveals both their organization and hidden relationships among their constituents. Most community detection methods currently available are not deterministic, and their results typically depend on…

Physics and Society · Physics 2012-03-29 Andrea Lancichinetti , Santo Fortunato

Attention is fundamental to cognition, yet it remains a challenge to understand attention in tasks approaching real-world complexity. Here, we approached this problem by modeling gaze patterns of monkeys playing Pac-Man. We first show a…

Neurons and Cognition · Quantitative Biology 2025-08-12 Zhongqiao Lin , Yunwei Li , Tianming Yang

In this paper, we develop a graphical modeling framework for the inference of networks across multiple sample groups and data types. In medical studies, this setting arises whenever a set of subjects, which may be heterogeneous due to…

Brain tumor segmentation remains a challenge in medical image segmentation tasks. With the application of transformer in various computer vision tasks, transformer blocks show the capability of learning long-distance dependency in global…

Image and Video Processing · Electrical Eng. & Systems 2022-12-07 Liqun Huang , Long Chen , Baihai Zhang , Senchun Chai

Objective: In recent years, the functional connectivity of the human brain has been studied with graph theoretical tools. One such approach is community detection which is fundamental for uncovering the localized networks. Existing methods…

Signal Processing · Electrical Eng. & Systems 2022-09-27 Abdullah Karaaslanli , Meiby Ortiz-Bouza , Tamanna T. K. Munia , Selin Aviyente

Transformer-based models have become state-of-the-art tools in various machine learning tasks, including time series classification, yet their complexity makes understanding their internal decision-making challenging. Existing…

Machine Learning · Computer Science 2025-11-27 Matīss Kalnāre , Sofoklis Kitharidis , Thomas Bäck , Niki van Stein

Clustering is a fundamental problem in network analysis that finds closely connected groups of nodes and separates them from other nodes in the graph, while link prediction is to predict whether two nodes in a network are likely to have a…

Social and Information Networks · Computer Science 2022-11-29 Shanfan Zhang , Wenjiao Zhang , Zhan Bu

Deep neural networks are a family of computational models that have led to a dramatical improvement of the state of the art in several domains such as image, voice or text analysis. These methods provide a framework to model complex,…

Machine Learning · Statistics 2018-02-12 Louis Falissard , Guy Fagherazzi , Newton Howard , Bruno Falissard

In this paper, we introduce a hierarchical extension of the stochastic blockmodel to identify multilevel community structures in networks. We also present a Markov chain Monte Carlo (MCMC) and a variational Bayes algorithm to fit the model…

Methodology · Statistics 2024-10-07 Pedro Regueiro , Abel Rodríguez , Juan Sosa

This work presents an unsupervised deep discriminant analysis for clustering. The method is based on deep neural networks and aims to minimize the intra-cluster discrepancy and maximize the inter-cluster discrepancy in an unsupervised…

Machine Learning · Computer Science 2022-06-13 Jinyu Cai , Wenzhong Guo , Jicong Fan

Many fields, such as neuroscience, are experiencing the vast proliferation of cellular data, underscoring the need for organizing and interpreting large datasets. A popular approach partitions data into manageable subsets via hierarchical…

Quantitative Methods · Quantitative Biology 2024-03-07 Diek W. Wheeler , Giorgio A. Ascoli

Face clustering is a useful tool for applications like automatic face annotation and retrieval. The main challenge is that it is difficult to cluster images from the same identity with different face poses, occlusions, and image quality.…

Computer Vision and Pattern Recognition · Computer Science 2021-04-26 Jinxing Ye , Xioajiang Peng , Baigui Sun , Kai Wang , Xiuyu Sun , Hao Li , Hanqing Wu

In the field of medical CT image processing, convolutional neural networks (CNNs) have been the dominant technique.Encoder-decoder CNNs utilise locality for efficiency, but they cannot simulate distant pixel interactions properly.Recent…

Image and Video Processing · Electrical Eng. & Systems 2022-11-03 Hongyang He , Feng Ziliang , Yuanhang Zheng , Shudong Huang , HaoBing Gao

The brain is a highly complex system. Most of such complexity stems from the intermingled connections between its parts, which give rise to rich dynamics and to the emergence of high-level cognitive functions. Disentangling the underlying…

Neurons and Cognition · Quantitative Biology 2023-08-14 Vito Dichio , Fabrizio De Vico Fallani

Classification and clustering have been studied separately in machine learning and computer vision. Inspired by the recent success of deep learning models in solving various vision problems (e.g., object recognition, semantic segmentation)…

Machine Learning · Computer Science 2017-12-13 Ali Borji , Aysegul Dundar