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Graph Transformer shows remarkable potential in brain network analysis due to its ability to model graph structures and complex node relationships. Most existing methods typically model the brain as a flat network, ignoring its modular…

Machine Learning · Computer Science 2025-11-25 Jiajun Ma , Yongchao Zhang , Chao Zhang , Zhao Lv , Shengbing Pei

Interpreting the prediction mechanism of complex models is currently one of the most important tasks in the machine learning field, especially with layered neural networks, which have achieved high predictive performance with various…

Machine Learning · Statistics 2018-10-04 Chihiro Watanabe

Layered neural networks have greatly improved the performance of various applications including image processing, speech recognition, natural language processing, and bioinformatics. However, it is still difficult to discover or interpret…

Machine Learning · Statistics 2017-10-05 Chihiro Watanabe , Kaoru Hiramatsu , Kunio Kashino

Human brains are commonly modeled as networks of Regions of Interest (ROIs) and their connections for the understanding of brain functions and mental disorders. Recently, Transformer-based models have been studied over different types of…

Machine Learning · Computer Science 2022-10-18 Xuan Kan , Wei Dai , Hejie Cui , Zilong Zhang , Ying Guo , Carl Yang

Brain network analysis based on functional Magnetic Resonance Imaging (fMRI) is pivotal for diagnosing brain disorders. Existing approaches typically rely on predefined functional sub-networks to construct sub-network associations. However,…

Machine Learning · Computer Science 2026-03-11 Jingfeng Tang , Peng Cao , Guangqi Wen , Jinzhu Yang , Xiaoli Liu , Osmar R. Zaiane

Mining human-brain networks to discover patterns that can be used to discriminate between healthy individuals and patients affected by some neurological disorder, is a fundamental task in neuroscience. Learning simple and interpretable…

Social and Information Networks · Computer Science 2020-06-11 Tommaso Lanciano , Francesco Bonchi , Aristides Gionis

The hierarchical structure inherent in many real-world datasets makes the modeling of such hierarchies a crucial objective in both unsupervised and supervised machine learning. While recent advancements have introduced deep architectures…

Machine Learning · Computer Science 2025-12-19 Emanuele Palumbo , Moritz Vandenhirtz , Alain Ryser , Imant Daunhawer , Julia E. Vogt

Neuroscientific research has revealed that the complex brain network can be organized into distinct functional communities, each characterized by a cohesive group of regions of interest (ROIs) with strong interconnections. These communities…

Neurons and Cognition · Quantitative Biology 2024-03-14 Yanting Yang , Beidi Zhao , Zhuohao Ni , Yize Zhao , Xiaoxiao Li

Community detection algorithms have been widely used to study the organization of complex systems like the brain. A principal appeal of these techniques is their ability to identify a partition of brain regions (or nodes) into communities,…

Neurons and Cognition · Quantitative Biology 2017-04-20 Arian Ashourvan , Qawi K. Telesford , Timothy Verstynen , Jean M. Vettel , Danielle S. Bassett

Our interest is in multiplex network data with multiple network samples observed across the same set of nodes. Examples originate from a variety of fields, including brain connectivity, international trade networks, and social networks,…

Methodology · Statistics 2026-04-21 Yuren Zhou , Yuqi Gu , David B. Dunson

Clustering is a fundamental analysis tool aiming at classifying data points into groups based on their similarity or distance. It has found successful applications in all natural and social sciences, including biology, physics, economics,…

Information Retrieval · Computer Science 2021-02-24 Wen-Bo Xie , Yan-Li Lee , Cong Wang , Duan-Bing Chen , Tao Zhou

Modular and hierarchical community structures are pervasive in real-world complex systems. A great deal of effort has gone into trying to detect and study these structures. Important theoretical advances in the detection of modular have…

Social and Information Networks · Computer Science 2023-06-01 Michael T. Schaub , Jiaze Li , Leto Peel

Community detection is a critical challenge in analysing real graphs, including social, transportation, citation, cybersecurity, and many other networks. This article proposes three new, general, hierarchical frameworks to deal with this…

Social and Information Networks · Computer Science 2023-05-25 Łukasz Brzozowski , Grzegorz Siudem , Marek Gagolewski

Multiplex networks have emerged as a promising approach for modeling complex systems, where each layer represents a different mode of interaction among entities of the same type. A core task in analyzing these networks is to identify the…

Social and Information Networks · Computer Science 2024-11-11 Meiby Ortiz-Bouza , Selin Aviyente

Community structure in networks is observed in many different domains, and unsupervised community detection has received a lot of attention in the literature. Increasingly the focus of network analysis is shifting towards using network…

Methodology · Statistics 2020-03-02 Jesús Arroyo , Elizaveta Levina

Clinical neuroimaging data is naturally hierarchical. Different magnetic resonance imaging (MRI) sequences within a series, different slices covering the head, and different regions within each slice all confer different information. In…

Image and Video Processing · Electrical Eng. & Systems 2024-01-18 David A. Wood

Networks involved in information processing often have their nodes arranged hierarchically, with the majority of connections occurring in adjacent levels. However, despite being an intuitively appealing concept, the hierarchical…

Neurons and Cognition · Quantitative Biology 2024-07-02 Anand Pathak , Shakti N. Menon , Sitabhra Sinha

This paper represents a contribution to the study of the brain functional connectivity from the perspective of complex networks theory. More specifically, we apply graph theoretical analyses to provide evidence of the modular structure of…

Neurons and Cognition · Quantitative Biology 2016-09-06 Giampiero Bardella , Angelo Bifone , Andrea Gabrielli , Alessandro Gozzi , Tiziano Squartini

This paper presents a deep neural-network-based hierarchical graphical model for individual and group activity recognition in surveillance scenes. Deep networks are used to recognize the actions of individual people in a scene. Next, a…

Computer Vision and Pattern Recognition · Computer Science 2015-06-16 Zhiwei Deng , Mengyao Zhai , Lei Chen , Yuhao Liu , Srikanth Muralidharan , Mehrsan Javan Roshtkhari , Greg Mori

This paper introduces a clustering framework for networks with nodes annotated with time-series data. The framework addresses all types of network-clustering problems: State clustering, node clustering within states (a.k.a. topology…

Machine Learning · Computer Science 2020-02-25 Cong Ye , Konstantinos Slavakis , Pratik V. Patil , Johan Nakuci , Sarah F. Muldoon , John Medaglia
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