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Representation learning is a fundamental building block for analyzing entities in a database. While the existing embedding learning methods are effective in various data mining problems, their applicability is often limited because these…

Machine Learning · Computer Science 2020-09-24 Chin-Chia Michael Yeh , Dhruv Gelda , Zhongfang Zhuang , Yan Zheng , Liang Gou , Wei Zhang

We propose a learning framework to find the representation of a robot's kinematic structure and motion embedding spaces using graph neural networks (GNN). Finding a compact and low-dimensional embedding space for complex phenomena is a key…

Robotics · Computer Science 2023-02-01 J. Taery Kim , Jeongeun Park , Sungjoon Choi , Sehoon Ha

Graph auto-encoders have proved to be useful in network embedding task. However, current models only consider explicit structures and fail to explore the informative latent structures cohered in networks. To address this issue, we propose a…

Machine Learning · Computer Science 2021-10-01 Minglong Lei , Yong Shi , Lingfeng Niu

Network inference, the task of reconstructing interactions in a complex system from experimental observables, is a central yet extremely challenging problem in systems biology. While much progress has been made in the last two decades,…

Quantitative Methods · Quantitative Biology 2024-09-12 Stephen Y Zhang

Heterogeneous, interconnected, systems-level, molecular data have become increasingly available and key in precision medicine. We need to utilize them to better stratify patients into risk groups, discover new biomarkers and targets,…

Other Quantitative Biology · Quantitative Biology 2024-05-17 Natasa Przulj , Noel Malod-Dognin

We consider causal inference in the presence of unobserved confounding. We study the case where a proxy is available for the unobserved confounding in the form of a network connecting the units. For example, the link structure of a social…

Machine Learning · Statistics 2019-06-03 Victor Veitch , Yixin Wang , David M. Blei

Real networks exhibit heterogeneous nature with nodes playing far different roles in structure and function. To identify vital nodes is thus very significant, allowing us to control the outbreak of epidemics, to conduct advertisements for…

Physics and Society · Physics 2016-09-21 Linyuan Lü , Duanbing Chen , Xiao-Long Ren , Qian-Ming Zhang , Yi-Cheng Zhang , Tao Zhou

Mining graph data has become a popular research topic in computer science and has been widely studied in both academia and industry given the increasing amount of network data in the recent years. However, the huge amount of network data…

Machine Learning · Computer Science 2020-01-03 Wenwu Zhu , Xin Wang , Peng Cui

A network embedding consists of a vector representation for each node in the network. Its usefulness has been shown in many real-world application domains, such as social networks and web networks. Directed networks with text associated…

Machine Learning · Computer Science 2020-11-30 Kexuan Sun , Shudan Zhong , Hong Xu

Recent advances in the field of network embedding have shown that low-dimensional network representation is playing a critical role in network analysis. Most existing network embedding methods encode the local proximity of a node, such as…

Social and Information Networks · Computer Science 2019-06-11 Junliang Guo , Linli Xu , Jingchang Liu

Transfer learning for feature extraction can be used to exploit deep representations in contexts where there is very few training data, where there are limited computational resources, or when tuning the hyper-parameters needed for training…

Learning and inferring features that generate sensory input is a task continuously performed by cortex. In recent years, novel algorithms and learning rules have been proposed that allow neural network models to learn such features from…

Neurons and Cognition · Quantitative Biology 2021-04-13 Yasser Roudi , Graham Taylor

Network embedding aims to find a way to encode network by learning an embedding vector for each node in the network. The network often has property information which is highly informative with respect to the node's position and role in the…

Social and Information Networks · Computer Science 2018-11-28 Enya Shen , Zhidong Cao , Changqing Zou , Jianmin Wang

Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

Social and Information Networks · Computer Science 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński

Recent advances in neural networks have solved common graph problems such as link prediction, node classification, node clustering, node recommendation by developing embeddings of entities and relations into vector spaces. Graph embeddings…

Social and Information Networks · Computer Science 2021-11-19 Archit Parnami , Mayuri Deshpande , Anant Kumar Mishra , Minwoo Lee

Heterogeneous networks are widely used to model real-world semi-structured data. The key challenge of learning over such networks is the modeling of node similarity under both network structures and contents. To deal with network…

Social and Information Networks · Computer Science 2019-10-04 Carl Yang , Mengxiong Liu , Frank He , Xikun Zhang , Jian Peng , Jiawei Han

Network embedding methodologies, which learn a distributed vector representation for each vertex in a network, have attracted considerable interest in recent years. Existing works have demonstrated that vertex representation learned through…

Machine Learning · Computer Science 2018-08-22 Vachik S. Dave , Baichuan Zhang , Pin-Yu Chen , Mohammad Al Hasan

Link prediction is a popular research topic in network analysis. In the last few years, new techniques based on graph embedding have emerged as a powerful alternative to heuristics. In this article, we study the problem of systematic biases…

Social and Information Networks · Computer Science 2018-11-30 Aakash Sinha , Rémy Cazabet , Rémi Vaudaine

Complex networks, which are the abstractions of many real-world systems, present a persistent challenge across disciplines for people to decipher their underlying information. Recently, hyperbolic geometry of latent spaces has gained…

Social and Information Networks · Computer Science 2024-05-28 Kai Zheng , Qilong Feng , Yaohang Li , Qichang Zhao , Jinhui Xu , Jianxin Wang

Heterogeneous graphs (HGs) also known as heterogeneous information networks have become ubiquitous in real-world scenarios; therefore, HG embedding, which aims to learn representations in a lower-dimension space while preserving the…

Social and Information Networks · Computer Science 2020-12-02 Xiao Wang , Deyu Bo , Chuan Shi , Shaohua Fan , Yanfang Ye , Philip S. Yu