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Building and analysing knowledge graphs (KGs) to aid drug discovery is a topical area of research. A salient feature of KGs is their ability to combine many heterogeneous data sources in a format that facilitates discovering connections.…

Computation and Language · Computer Science 2023-10-25 J. Charles G. Jeynes , Tim James , Matthew Corney

Model-based reinforcement learning is a compelling framework for data-efficient learning of agents that interact with the world. This family of algorithms has many subcomponents that need to be carefully selected and tuned. As a result the…

Artificial Intelligence · Computer Science 2021-04-21 Luis Pineda , Brandon Amos , Amy Zhang , Nathan O. Lambert , Roberto Calandra

This report provides an (updated) overview of {\sl Grafalgo}, an open-source library of graph algorithms and the data structures used to implement them. The programs in this library were originally written to support a graduate class in…

Data Structures and Algorithms · Computer Science 2016-01-08 Jonathan Turner

Extracting relevant and structured knowledge from large, complex technical documents within the Reliability and Maintainability (RAM) domain is labor-intensive and prone to errors. Our work addresses this challenge by presenting OntoKGen, a…

Artificial Intelligence · Computer Science 2024-12-11 Mohammad Sadeq Abolhasani , Rong Pan

The Tajik language, written in Cyrillic script, remains severely under-resourced in terms of publicly available natural language processing (NLP) toolkits, hindering both linguistic research and applied development. This paper introduces…

Computation and Language · Computer Science 2026-05-29 Mullosharaf K. Arabov

Recent advancements in Large Language Models (LLMs) have led to high-quality Machine-Generated Text (MGT), giving rise to countless new use cases and applications. However, easy access to LLMs is posing new challenges due to misuse. To…

Computation and Language · Computer Science 2024-04-15 Areg Mikael Sarvazyan , José Ángel González , Marc Franco-Salvador

Document-level knowledge graph (KG) construction faces a fundamental scaling challenge: existing methods either rely on expensive large language models (LLMs), making them economically nonviable for large-scale corpora, or employ smaller…

In this paper, we conduct an empirical evaluation of Temporal Graph Benchmark (TGB) by extending our Dynamic Graph Library (DyGLib) to TGB. Compared with TGB, we include eleven popular dynamic graph learning methods for more exhaustive…

Machine Learning · Computer Science 2023-10-17 Le Yu

With few exceptions, the field of Machine Learning (ML) research has largely ignored the browser as a computational engine. Beyond an educational resource for ML, the browser has vast potential to not only improve the state-of-the-art in ML…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-06-18 Edward Meeds , Remco Hendriks , Said Al Faraby , Magiel Bruntink , Max Welling

We present mechanoChemML, a machine learning software library for computational materials physics. mechanoChemML is designed to function as an interface between platforms that are widely used for machine learning on one hand, and others for…

Computational Engineering, Finance, and Science · Computer Science 2022-05-03 X. Zhang , G. H. Teichert , Z. Wang , M. Duschenes , S. Srivastava , E. Livingston , J. Holber , M. Faghih Shojaei , A. Sundararajan , K. Garikipati

The role of large language models (LLMs) in enterprise modeling has recently started to shift from academic research to that of industrial applications. Thereby, LLMs represent a further building block for the machine-supported generation…

Multiagent Systems · Computer Science 2025-01-08 Benedikt Reitemeyer , Hans-Georg Fill

xMLC is the second book of this `Machine Learning Tools in Fluid Mechanics' Series and focuses on Machine Learning Control (MLC). The objectives of this book are two-fold: First, provide an introduction to MLC for students, researchers, and…

Fluid Dynamics · Physics 2022-08-30 Guy Y. Cornejo Maceda , François Lusseyran , Bernd R. Noack

Navigating, visualizing, and discovery in graph data is frequently a difficult prospect. This is especially true for knowledge graphs (KGs), due to high number of possible labeled connections to other data. However, KGs are frequently…

Human-Computer Interaction · Computer Science 2025-08-12 Antrea Christou , Cogan Shimizu

Graph Machine Learning (GML) with Graph Databases (GDBs) has gained significant relevance in recent years, due to its ability to handle complex interconnected data and apply ML techniques using Graph Data Science (GDS). However, a critical…

Databases · Computer Science 2026-01-22 Rosario Napoli , Antonio Celesti , Massimo Villari , Maria Fazio

Machine learning (ML) offers powerful methods for detecting and modeling associations often in data with large feature spaces and complex associations. Many useful tools/packages (e.g. scikit-learn) have been developed to make the various…

Machine Learning · Computer Science 2022-06-27 Ryan J. Urbanowicz , Robert Zhang , Yuhan Cui , Pranshu Suri

Large Language Models (LLMs) have shown unprecedented performance in various real-world applications. However, they are known to generate factually inaccurate outputs, a.k.a. the hallucination problem. In recent years, incorporating…

Computation and Language · Computer Science 2024-06-21 Haochen Liu , Song Wang , Yaochen Zhu , Yushun Dong , Jundong Li

As data science and machine learning methods are taking on an increasingly important role in the materials research community, there is a need for the development of machine learning software tools that are easy to use (even for nonexperts…

Computational Physics · Physics 2020-06-26 Ryan Jacobs , Tam Mayeshiba , Ben Afflerbach , Luke Miles , Max Williams , Matthew Turner , Raphael Finkel , Dane Morgan

Large language models (LLMs) have demonstrated human-level performance on a vast spectrum of natural language tasks. However, it is largely unexplored whether they can better internalize knowledge from a structured data, such as a knowledge…

Computation and Language · Computer Science 2022-05-18 Fedor Moiseev , Zhe Dong , Enrique Alfonseca , Martin Jaggi

In this work we propose a novel end-to-end multi-stage Knowledge Graph (KG) generation system from textual inputs, separating the overall process into two stages. The graph nodes are generated first using pretrained language model, followed…

Computation and Language · Computer Science 2022-11-22 Igor Melnyk , Pierre Dognin , Payel Das

Phenotyping consists in applying algorithms to identify individuals associated with a specific, potentially complex, trait or condition, typically out of a collection of Electronic Health Records (EHRs). Because a lot of the clinical…

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