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Recently, the deep learning community has given growing attention to neural architectures engineered to learn problems in relational domains. Convolutional Neural Networks employ parameter sharing over the image domain, tying the weights of…

Machine Learning · Computer Science 2019-02-26 Marcelo O. R. Prates , Pedro H. C. Avelar , Henrique Lemos , Marco Gori , Luis Lamb

Proposing an effective and flexible matrix to represent a graph is a fundamental challenge that has been explored from multiple perspectives, e.g., filtering in Graph Fourier Transforms. In this work, we develop a novel and general…

Machine Learning · Computer Science 2023-05-11 Mingqi Yang , Wenjie Feng , Yanming Shen , Bryan Hooi

We study heat semigroups generated by self-adjoint Laplace operators on metric graphs characterized by the property that the local scattering matrices associated with each vertex of the graph are independent from the spectral parameter. For…

Mathematical Physics · Physics 2008-02-05 Vadim Kostrykin , Jurgen Potthoff , Robert Schrader

In this paper we develop the parametrix approach for constructing the heat kernel on a graph $G$. In particular, we highlight two specific cases. First, we consider the case when $G$ is embedded in a Eulidean domain or manifold $\Omega$,…

Analysis of PDEs · Mathematics 2023-08-09 Gautam Chinta , Jay Jorgenson , Anders Karlsson , Lejla Smajlović

The problem of modifying a given graph to satisfy certain properties has been one of the central topics in parameterized tractability study. In this paper, we study the cycle contraction problem, which makes a graph into a cycle by edge…

Data Structures and Algorithms · Computer Science 2017-06-20 Bin Sheng , Yuefang Sun

Uncertainty principles present an important theoretical tool in signal processing, as they provide limits on the time-frequency concentration of a signal. In many real-world applications the signal domain has a complicated irregular…

Information Theory · Computer Science 2023-06-29 Elizaveta Rebrova , Palina Salanevich

A distributed algorithm performs local computations on pieces of input and communicates the results through given communication links. When processing a massive graph in a distributed algorithm, local outputs must be configured as a…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-12-06 Fan Chung , Olivia Simpson

Certifying feasibility in decision-making, critical in many industries, can be framed as a constraint satisfaction problem. This paper focuses on characterising a subset of parameter values from an a priori set that satisfy constraints on a…

Systems and Control · Electrical Eng. & Systems 2025-11-14 Max Mowbray , Nilay Shah , Benoît Chachuat

Finding maximum-cardinality matchings in undirected graphs is arguably one of the most central graph primitives. For $m$-edge and $n$-vertex graphs, it is well-known to be solvable in $O(m\sqrt{n})$ time; however, for several applications…

Data Structures and Algorithms · Computer Science 2020-07-24 George B. Mertzios , André Nichterlein , Rolf Niedermeier

We study the existence and uniqueness of the heat kernel on infinite, locally finite, connected graphs. For general graphs, a uniqueness criterion, shown to be optimal, is given in terms of the maximal valence on spheres about a fixed…

Spectral Theory · Mathematics 2008-04-24 Radoslaw K. Wojciechowski

Graph kernels have become an established and widely-used technique for solving classification tasks on graphs. This survey gives a comprehensive overview of techniques for kernel-based graph classification developed in the past 15 years. We…

Machine Learning · Computer Science 2020-02-05 Nils M. Kriege , Fredrik D. Johansson , Christopher Morris

We present novel graph kernels for graphs with node and edge labels that have ordered neighborhoods, i.e. when neighbor nodes follow an order. Graphs with ordered neighborhoods are a natural data representation for evolving graphs where…

Machine Learning · Computer Science 2018-05-30 Moez Draief , Konstantin Kutzkov , Kevin Scaman , Milan Vojnovic

Kernelization studies polynomial-time preprocessing algorithms. Over the last 20 years, the most celebrated positive results of the field have been linear kernels for classical NP-hard graph problems on sparse graph classes. In this paper,…

Data Structures and Algorithms · Computer Science 2025-11-06 Christian Bertram , Deborah Haun , Mads Vestergaard Jensen , Tuukka Korhonen

We propose a new graph-theoretic benchmark in this paper. The benchmark is developed to address shortcomings of an existing widely-used graph benchmark. We thoroughly studied a large number of traditional and contemporary graph algorithms…

Performance · Computer Science 2010-05-06 Andy B. Yoo , Yang Liu , Sheila Vaidya , Stephen Poole

In this paper, based on neural networks, we develop a data-driven model for extremely fast prediction of steady-state heat convection of a hot object with arbitrary complex geometry in a two-dimensional space. According to the governing…

Applied Physics · Physics 2021-01-12 Jiang-Zhou Peng , Xianglei Liu , Nadine Aubry , Zhihua Chen , Wei-Tao Wu

Non-linear kernel methods can be approximated by fast linear ones using suitable explicit feature maps allowing their application to large scale problems. We investigate how convolution kernels for structured data are composed from base…

Machine Learning · Computer Science 2019-11-26 Nils M. Kriege , Marion Neumann , Christopher Morris , Kristian Kersting , Petra Mutzel

Computing maximum independent sets in graphs is an important problem in computer science. In this paper, we develop an evolutionary algorithm to tackle the problem. The core innovations of the algorithm are very natural combine operations…

Data Structures and Algorithms · Computer Science 2015-02-06 Sebastian Lamm , Peter Sanders , Christian Schulz

Deciphering cell type heterogeneity is crucial for systematically understanding tissue homeostasis and its dysregulation in diseases. Computational deconvolution is an efficient approach estimating cell type abundances from a variety of…

Other Quantitative Biology · Quantitative Biology 2023-09-06 Lana X. Garmire , Yijun Li , Qianhui Huang , Chuan Xu , Sarah Teichmann , Naftali Kaminski , Matteo Pellegrini , Quan Nguyen , Andrew E. Teschendorff

The rise of graph analytic systems has created a need for ways to measure and compare the capabilities of these systems. Graph analytics present unique scalability difficulties. The machine learning, high performance computing, and visual…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-07 Siddharth Samsi , Vijay Gadepally , Michael Hurley , Michael Jones , Edward Kao , Sanjeev Mohindra , Paul Monticciolo , Albert Reuther , Steven Smith , William Song , Diane Staheli , Jeremy Kepner

While a common assumption in graph signal analysis is the smoothness of the signals or the band-limitedness of their spectrum, in many instances the spectrum of real graph data may be concentrated at multiple regions of the spectrum,…

Machine Learning · Statistics 2025-02-20 Osman Furkan Kar , Gülce Turhan , Elif Vural