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We introduce provenance networks, a novel class of neural models designed to provide end-to-end, training-data-driven explainability. Unlike conventional post-hoc methods, provenance networks learn to link each prediction directly to its…

Computer Vision and Pattern Recognition · Computer Science 2025-10-07 Ali Kayyam , Anusha Madan Gopal , M. Anthony Lewis

Sustainable research on computational models of neuronal networks requires published models to be understandable, reproducible, and extendable. Missing details or ambiguities about mathematical concepts and assumptions, algorithmic…

It is widely believed that the brain performs approximate probabilistic inference to estimate causal variables in the world from ambiguous sensory data. To understand these computations, we need to analyze how information is represented and…

Neurons and Cognition · Quantitative Biology 2017-05-16 Xaq Pitkow , Dora Angelaki

Several studies have explored the mechanisms of large language models (LLMs) in coding tasks, but most have focused on programming languages (PLs) in a monolingual setting. In this paper, we investigate the relationship between multiple PLs…

Computation and Language · Computer Science 2025-06-03 Amir Hossein Kargaran , Yihong Liu , François Yvon , Hinrich Schütze

Neural networks with tree-based sentence encoders have shown better results on many downstream tasks. Most of existing tree-based encoders adopt syntactic parsing trees as the explicit structure prior. To study the effectiveness of…

Computation and Language · Computer Science 2018-08-30 Haoyue Shi , Hao Zhou , Jiaze Chen , Lei Li

Recent advances in large language models (LLMs) have shown that test-time scaling can substantially improve model performance on complex tasks, particularly in the coding domain. Under this paradigm, models use a larger token budget during…

Artificial Intelligence · Computer Science 2026-04-21 Jiaxin Fang , Runyuan He , Sahil Bhatia , Neel Gajare , Alvin Cheung

Can we take a recurrent neural network (RNN) trained to translate between languages and augment it to support a new natural language without retraining the model from scratch? Can we fix the faulty behavior of the RNN by replacing portions…

Software Engineering · Computer Science 2023-02-10 Sayem Mohammad Imtiaz , Fraol Batole , Astha Singh , Rangeet Pan , Breno Dantas Cruz , Hridesh Rajan

How perception and reasoning arise from neuronal network activity is poorly understood. This is reflected in the fundamental limitations of connectionist artificial intelligence, typified by deep neural networks trained via gradient-based…

Artificial Intelligence · Computer Science 2020-02-27 Paul J. Blazek , Milo M. Lin

Many neural networks deployed in the real world scenarios are trained using cross entropy based loss functions. From the optimization perspective, it is known that the behavior of first order methods such as gradient descent crucially…

Machine Learning · Computer Science 2023-10-09 Zhu Wang , Praveen Raj Veluswami , Harsh Mishra , Sathya N. Ravi

Program comprehension is a fundamental task in software development and maintenance processes. Software developers often need to understand a large amount of existing code before they can develop new features or fix bugs in existing…

Machine Learning · Computer Science 2019-10-29 Vinoj Jayasundara , Nghi Duy Quoc Bui , Lingxiao Jiang , David Lo

One of the most significant challenges in the field of software code auditing is the presence of vulnerabilities in software source code. Every year, more and more software flaws are discovered, either internally in proprietary code or…

Cryptography and Security · Computer Science 2023-06-16 Mst Shapna Akter , Hossain Shahriar , Juan Rodriguez Cardenas , Sheikh Iqbal Ahamed , Alfredo Cuzzocrea

With the great success of pre-trained models, the pretrain-then-finetune paradigm has been widely adopted on downstream tasks for source code understanding. However, compared to costly training a large-scale model from scratch, how to…

Software Engineering · Computer Science 2022-03-16 Deze Wang , Zhouyang Jia , Shanshan Li , Yue Yu , Yun Xiong , Wei Dong , Xiangke Liao

Learning and decision making in the brain are key processes critical to survival, and yet are processes implemented by non-ideal biological building blocks which can impose significant error. We explore quantitatively how the brain might…

Neurons and Cognition · Quantitative Biology 2011-04-19 Jake Bouvrie , Jean-Jacques Slotine

In this paper, we propose Describe-and-Dissect (DnD), a novel method to describe the roles of hidden neurons in vision networks. DnD utilizes recent advancements in multimodal deep learning to produce complex natural language descriptions,…

Computer Vision and Pattern Recognition · Computer Science 2025-02-20 Nicholas Bai , Rahul A. Iyer , Tuomas Oikarinen , Akshay Kulkarni , Tsui-Wei Weng

Multilingual large language models (LLMs) achieve strong performance across languages, yet how language capabilities are organized at the neuron level remains poorly understood. Prior work has identified language-related neurons mainly…

Computation and Language · Computer Science 2026-03-11 Yifan Le , Yunliang Li

Current Multimodal Large Language Model (MLLM) architectures face a critical tradeoff between performance and efficiency: decoder-only architectures achieve higher performance but lower efficiency, while cross-attention-based architectures…

Computer Vision and Pattern Recognition · Computer Science 2025-06-02 Hongliang Li , Jiaxin Zhang , Wenhui Liao , Dezhi Peng , Kai Ding , Lianwen Jin

Recently, many pre-trained language models for source code have been proposed to model the context of code and serve as a basis for downstream code intelligence tasks such as code completion, code search, and code summarization. These…

Software Engineering · Computer Science 2022-02-15 Yao Wan , Wei Zhao , Hongyu Zhang , Yulei Sui , Guandong Xu , Hai Jin

Vision capabilities in vision large language models (VLLMs) have consistently lagged behind their linguistic capabilities. In particular, numerous benchmark studies have demonstrated that VLLMs struggle when fine-grained visual information…

Computer Vision and Pattern Recognition · Computer Science 2026-02-09 Darryl Hannan , John Cooper , Dylan White , Yijing Watkins

One of the fundamental principles of contemporary linguistics states that language processing requires the ability to extract recursively nested tree structures. However, it remains unclear whether and how this code could be implemented in…

Computation and Language · Computer Science 2021-01-08 Yair Lakretz , Théo Desbordes , Jean-Rémi King , Benoît Crabbé , Maxime Oquab , Stanislas Dehaene

Recent studies strive to incorporate various human rationales into neural networks to improve model performance, but few pay attention to the quality of the rationales. Most existing methods distribute their models' focus to…

Computation and Language · Computer Science 2021-06-04 Quzhe Huang , Shengqi Zhu , Yansong Feng , Dongyan Zhao