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Benchmark data sets are an indispensable ingredient of the evaluation of graph-based machine learning methods. We release a new data set, compiled from International Planning Competitions (IPC), for benchmarking graph classification,…

Machine Learning · Computer Science 2019-05-17 Patrick Ferber , Tengfei Ma , Siyu Huo , Jie Chen , Michael Katz

Graph databases have been the subject of significant research and development. Problems such as modularity, centrality, alignment, and clustering have been formalized and solved in various application contexts. In this paper, we focus on…

Social and Information Networks · Computer Science 2019-08-09 Vikram Ravindra , Huda Nassar , David F. Gleich , Ananth Grama

Node classification for graph-structured data aims to classify nodes whose labels are unknown. While studies on static graphs are prevalent, few studies have focused on dynamic graph node classification. Node classification on dynamic…

Machine Learning · Computer Science 2022-12-08 Jiarui Sun , Mengting Gu , Chin-Chia Michael Yeh , Yujie Fan , Girish Chowdhary , Wei Zhang

Scalable graph neural networks (GNNs) have emerged as a promising technique, which exhibits superior predictive performance and high running efficiency across numerous large-scale graph-based web applications. However, (i) Most scalable…

Machine Learning · Computer Science 2024-02-12 Xunkai Li , Jingyuan Ma , Zhengyu Wu , Daohan Su , Wentao Zhang , Rong-Hua Li , Guoren Wang

Graph neural networks (GNNs) have shown advantages in graph-based analysis tasks. However, most existing methods have the homogeneity assumption and show poor performance on heterophilic graphs, where the linked nodes have dissimilar…

Machine Learning · Computer Science 2024-04-16 Tianhao Peng , Wenjun Wu , Haitao Yuan , Zhifeng Bao , Zhao Pengrui , Xin Yu , Xuetao Lin , Yu Liang , Yanjun Pu

Causal discovery is crucial for causal inference in observational studies, as it can enable the identification of valid adjustment sets (VAS) for unbiased effect estimation. However, global causal discovery is notoriously hard in the…

Machine Learning · Statistics 2024-06-04 Jacqueline Maasch , Weishen Pan , Shantanu Gupta , Volodymyr Kuleshov , Kyra Gan , Fei Wang

Modern approaches for learning on dynamic graphs have adopted the use of batches instead of applying updates one by one. The use of batches allows these techniques to become helpful in streaming scenarios where updates to graphs are…

Machine Learning · Computer Science 2024-06-07 Or Feldman , Chaim Baskin

Graph Neural Networks (GNNs) require a large number of labeled graph samples to obtain good performance on the graph classification task. The performance of GNNs degrades significantly as the number of labeled graph samples decreases. To…

Machine Learning · Computer Science 2023-09-20 Abdullah Alchihabi , Yuhong Guo

Recently emerged Topological Deep Learning (TDL) methods aim to extend current Graph Neural Networks (GNN) by naturally processing higher-order interactions, going beyond the pairwise relations and local neighborhoods defined by graph…

Graph Neural Networks (GNNs) have achieved significant success in addressing node classification tasks. However, the effectiveness of traditional GNNs degrades on heterophilic graphs, where connected nodes often belong to different labels…

Machine Learning · Computer Science 2025-11-11 Asela Hevapathige , Asiri Wijesinghe , Ahad N. Zehmakan

Graph-based personality detection constructs graph structures from textual data, particularly social media posts. Current methods often struggle with sparse or noisy data and rely on static graphs, limiting their ability to capture dynamic…

Computation and Language · Computer Science 2025-04-04 Lingzhi Shen , Yunfei Long , Xiaohao Cai , Guanming Chen , Yuhan Wang , Imran Razzak , Shoaib Jameel

Graph classification, which aims to identify the category labels of graphs, plays a significant role in drug classification, toxicity detection, protein analysis etc. However, the limitation of scale in the benchmark datasets makes it easy…

Machine Learning · Computer Science 2021-04-06 Jiajun Zhou , Jie Shen , Shanqing Yu , Guanrong Chen , Qi Xuan

This paper introduces and demonstrates a computational pipeline for the statistical analysis of shape graph datasets, namely geometric networks embedded in 2D or 3D spaces. Unlike traditional abstract graphs, our purpose is not only to…

Machine Learning · Computer Science 2026-02-19 Murad Hossen , Demetrio Labate , Nicolas Charon

Large language models (LLMs) have been proposed as powerful tools for detecting software vulnerabilities, where task-specific fine-tuning is typically employed to provide vulnerability-specific knowledge to the LLMs. However, existing…

Software Engineering · Computer Science 2025-07-22 Ruijun Feng , Hammond Pearce , Pietro Liguori , Yulei Sui

We propose a new graph-theoretic benchmark in this paper. The benchmark is developed to address shortcomings of an existing widely-used graph benchmark. We thoroughly studied a large number of traditional and contemporary graph algorithms…

Performance · Computer Science 2010-05-06 Andy B. Yoo , Yang Liu , Sheila Vaidya , Stephen Poole

In document classification, graph-based models effectively capture document structure, overcoming sequence length limitations and enhancing contextual understanding. However, most existing graph document representations rely on heuristics,…

Computation and Language · Computer Science 2025-08-05 Margarita Bugueño , Gerard de Melo

Graphs are foundational across domains but remain hard to use without deep expertise. LLMs promise accessible natural language (NL) graph analytics, yet they fail to process industry-scale property graphs effectively and efficiently: such…

Graph neural networks (GNNs) have demonstrated a significant success in various graph learning tasks, from graph classification to anomaly detection. There recently has emerged a number of approaches adopting a graph pooling operation…

Machine Learning · Computer Science 2023-03-28 Yuzhou Chen , Yulia R. Gel

Rule-based fine-grained IP geolocation methods are hard to generalize in computer networks which do not follow hypothetical rules. Recently, deep learning methods, like multi-layer perceptron (MLP), are tried to increase generalization…

Machine Learning · Computer Science 2023-04-18 Shichang Ding , Xiangyang Luo , Jinwei Wang , Xiaoming Fu

Online topology estimation of graph-connected time series is challenging, especially since the causal dependencies in many real-world networks are nonlinear. In this paper, we propose a kernel-based algorithm for graph topology estimation.…

Machine Learning · Computer Science 2021-10-20 Rohan Money , Joshin Krishnan , Baltasar Beferull-Lozano
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