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In this work, we review the figures used to characterize an epidemic outbreak most. Particular attention is drawn to epidemic spreading at time-varying transition rates. A time-varying SIR-like model is used to describe the epidemic…

Populations and Evolution · Quantitative Biology 2020-11-06 Hernán De Battista , José García-Clúa , Sebastián Nuñez , Fernando Inthamoussou , Fabricio Garelli

Real epidemic spreading networks often composed of several kinds of networks interconnected with each other, and the interrelated networks have the different topologies and epidemic dynamics. Moreover, most human diseases are derived from…

Physics and Society · Physics 2017-06-21 Zhongpu Xu , Xinchu Fu

The generation interval is the time between the infection time of an infected person and the infection time of his or her infector. Probability density functions for generation intervals have been an important input for epidemic models and…

Quantitative Methods · Quantitative Biology 2023-10-24 Eben Kenah , Marc Lipsitch , James M. Robins

The current work deals with an epidemic model on the complete graph K_n on n vertices in a non-homogeneous setting, where the vertices may have distinct types. Different types differ in the probability of getting infected, and/or in the…

Probability · Mathematics 2022-05-10 Daniela Bertacchi , Jürgen Kampf , Ecaterina Sava-Huss , Fabio Zucca

Although previous infection and vaccination provide protection against SARS-CoV-2 infection, both reinfection and breakthrough infection are possible events whose occurrence would increase with time after first exposure to the antigen and…

Populations and Evolution · Quantitative Biology 2022-06-07 Ariel Félix Gualtieri , Carolina de la Cal , Augusto Francisco Toma , Pedro Hecht

Using a probability of novel encounter derived from a physical model, we augment the SIR compartmental model for disease spread. Scenarios with the same initial trajectories and identical $R_0$ values can diverge greatly depending on the…

Populations and Evolution · Quantitative Biology 2020-06-15 Peter Cotton

The use of network theory to model disease propagation on populations introduces important elements of reality to the classical epidemiological models. The use of random geometric graphs (RGG) is one of such network models that allows for…

Physics and Society · Physics 2016-12-21 Ernesto Estrada , Sandro Meloni , Matthew Sheerin , Yamir Moreno

We consider a threshold epidemic model on a clustered random graph with overlapping communities. In other words, our epidemic model is such that an individual becomes infected as soon as the proportion of her infected neighbors exceeds the…

Probability · Mathematics 2014-02-03 Emilie Coupechoux , Marc Lelarge

Random networks with specified degree distributions have been proposed as realistic models of population structure, yet the problem of dynamically modeling SIR-type epidemics in random networks remains complex. I resolve this dilemma by…

Populations and Evolution · Quantitative Biology 2007-05-23 Erik Volz

In this paper we consider a simple virus infection spread model on a finite population of $n$ agents connected by some neighborhood structure. Given a graph $G$ on $n$ vertices, we begin with some fixed number of initial infected vertices.…

Probability · Mathematics 2013-03-21 Antar Bandyopadhyay , Farkhondeh Sajadi

We study the phase transition from the persistence phase to the extinction phase for the SIRS (susceptible/ infected/ refractory/ susceptible) model of diseases spreading on the networks. We derive an analytical expression of the…

Populations and Evolution · Quantitative Biology 2019-11-18 M. Ali Saif

Network epidemics is a ubiquitous model that can represent different phenomena and finds applications in various domains. Among its various characteristics, a fundamental question concerns the time when an epidemic stops propagating. We…

Probability · Mathematics 2020-05-20 Daniel Figueiredo , Giulio Iacobelli , Seva Shneer

We present a stochastic model for two successive SIR (Susceptible, Infectious, Recovered) epidemics in the same network structured population. Individuals infected during the first epidemic might have (partial) immunity for the second one.…

Populations and Evolution · Quantitative Biology 2024-10-29 Frank Ball , Abid Ali Lashari , David Sirl , Pieter Trapman

The course of an epidemic is not only shaped by infection transmission over face-to-face contacts, but also by preventive behaviour caused by risk perception and social interactions. This study explores the dynamics of coupled awareness and…

Physics and Society · Physics 2025-02-24 Tim Van Wesemael , Luis E. C. Rocha , Jan M. Baetens

The size and shape of the region affected by an outbreak is relevant to understand the dynamics of a disease and help to organize future actions to mitigate similar events. A simple extension of the SIR model is considered, where agents…

Statistical Mechanics · Physics 2023-05-03 Paulo Murilo C. de Oliveira , Daniel A. Stariolo , Jeferson J. Arenzon

We study seasonal epidemic spreading in a susceptible-infected-removed-susceptible (SIRS) model on smallworld graphs. We derive a mean-field description that accurately captures the salient features of the model, most notably a phase…

Statistical Mechanics · Physics 2021-03-26 Daniel Malz , Andrea Pizzi , Andreas Nunnenkamp , Johannes Knolle

We study an individual-based stochastic SIR epidemic model with infection-age dependent infectivity on a large random graph, capturing individual heterogeneity and non-homogeneous connectivity. Each individual is associated with particular…

Probability · Mathematics 2026-02-11 Guodong Pang , Étienne Pardoux , Aurélien Velleret

Many complex networks exhibit vulnerability to spreading of epidemics, and such vulnerability relates to the viral strain as well as to the network characteristics. For instance, the structure of the network plays an important role in…

Physics and Society · Physics 2015-03-14 Mina Youssef , Caterina Scoglio

We study the spread of an SIRS-type epidemic with vaccination on network. Starting from an exact Markov description of the model, we investigate the mean epidemic lifetime by providing a sufficient condition for fast extinction that depends…

Dynamical Systems · Mathematics 2020-11-23 Stefania Ottaviano , Stefano Bonaccorsi

In an important paper, M.E.J. Newman claimed that a general network-based stochastic Susceptible-Infectious-Removed (SIR) epidemic model is isomorphic to a bond percolation model, where the bonds are the edges of the contact network and the…

Quantitative Methods · Quantitative Biology 2023-10-24 Eben Kenah , James M. Robins
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