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Related papers: Classical-to-Quantum Sequence Encoding in Genomics

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Among the genetic algorithms generally used for optimization problems in the recent decades, quantum-inspired variants are known for fast and high-fitness convergence and small resource requirement. Here the application to the patient…

Neural and Evolutionary Computing · Computer Science 2025-06-06 Akira SaiToh , Arezoo Modiri , Amit Sawant , Robabeh Rahimi

Sparse coding provides a versatile framework for efficiently capturing and representing crucial data (information) concisely, which plays an essential role in various computer science fields, including data compression, feature extraction,…

Quantum Physics · Physics 2024-11-15 Xun Ji , Qin Liu , Shang Huang , Andi Chen , Shengjun Wu

This paper introduces new tools for genomic signal processing, which can assist for genomic attribute extracting or describing biologically meaningful features embedded in a DNA. The codongrams and a2grams are offered as an alternative to…

Other Quantitative Biology · Quantitative Biology 2015-03-10 E. A. Bouton , H. M. de Oliveira , R. M. Campello de Souza , N. S. Santos-Magalhaes

Genomic signal processing has been used successfully in bioinformatics to analyze biomolecular sequences and gain varied insights into DNA structure, gene organization, protein binding, sequence evolution, etc. But challenges remain in…

Genomics · Quantitative Biology 2022-11-04 Saish Jaiswal , Shreya Nema , Hema A Murthy , Manikandan Narayanan

Quantum computing is an emerging paradigm with the potential to offer significant computational advantage over conventional classical computing by exploiting quantum-mechanical principles such as entanglement and superposition. It is…

Emerging Technologies · Computer Science 2021-09-23 Sukhpal Singh Gill , Adarsh Kumar , Harvinder Singh , Manmeet Singh , Kamalpreet Kaur , Muhammad Usman , Rajkumar Buyya

This paper shows how network coding and superdense coding can be combined to increase the classical data throughput by a factor $2-\epsilon$ (for arbitrarily small $\epsilon > 0$) compared to the maximum that could be achieved using either…

Quantum Physics · Physics 2020-07-01 Steven Herbert

Recent advances in quantum hardware motivate the development of algorithmic frameworks that integrate quantum sampling with classical inference. This work introduces a segmentation-based regression method tailored to quantum neural networks…

Quantum Physics · Physics 2025-07-02 James C. Hateley

In typical laser communications classical information is encoded by modulating the amplitude of the laser beam and measured via direct detection. We add a layer of security using quantum physics to this standard scheme, applicable to…

The classification of big data usually requires a mapping onto new data clusters which can then be processed by machine learning algorithms by means of more efficient and feasible linear separators. Recently, Lloyd et al. have advanced the…

Researchers in the field of DNA-based chaotic cryptography have recently proposed a set of novel and efficient image encryption algorithms. In this paper, we present a comprehensive summary of those techniques, which are available in the…

Cryptography and Security · Computer Science 2015-05-08 Chiranjoy Chattopadhyay , Bikramjit Sarkar , Debaprasad Mukherjee

A quantum computer needs the assistance of a classical algorithm to detect and identify errors that affect encoded quantum information. At this interface of classical and quantum computing the technique of machine learning has appeared as a…

Quantum Physics · Physics 2019-01-15 P. Baireuther , M. D. Caio , B. Criger , C. W. J. Beenakker , T. E. O'Brien

The genetic information that dictates the structure and function of all life forms is encoded in the DNA. In 1953, Watson and Crick first presented the double helical structure of a DNA molecule. Their findings unearthed the desire to…

Genomics · Quantitative Biology 2023-05-16 Olaitan Akintunde , Trichina Tucker , Valerie J. Carabetta

Quantum Machine Learning represents a paradigm shift at the intersection of Quantum Computing and Machine Learning, leveraging quantum phenomena such as superposition, entanglement, and quantum parallelism to address the limitations of…

Quantum Physics · Physics 2025-01-17 Sahil Tomar , Rajeshwar Tripathi , Sandeep Kumar

Quantum communication represents a revolutionary advancement over classical information theory, which leverages unique quantum mechanics properties like entanglement to achieve unprecedented capabilities in secure and efficient information…

Emerging Technologies · Computer Science 2024-06-14 Amit Kumar Bhuyan , Hrishikesh Dutta

Data encoding remains a fundamental bottleneck in quantum machine learning, where amplitude encoding of high-dimensional classical vectors into quantum states incurs exponential cost. In this work, we propose a pre-trained tensor-train (TT)…

Quantum Physics · Physics 2026-02-11 Jun Qi , Chao-Han Huck Yang , Pin-Yu Chen , Min-Hsiu Hsieh

Recent advances in DNA sequencing open prospects to make whole-genome analysis rapid and reliable, which is promising for various applications including personalized medicine. However, existing techniques for {\it de novo} genome assembly,…

Quantum machine learning consists in taking advantage of quantum computations to generate classical data. A potential application of quantum machine learning is to harness the power of quantum computers for generating classical data, a…

Genome data are crucial in modern medicine, offering significant potential for diagnosis and treatment. Thanks to technological advancements, many millions of healthy and diseased genomes have already been sequenced; however, obtaining the…

Genomics · Quantitative Biology 2024-06-18 Teddy Lazebnik , Liron Simon-Keren

We propose a modified MSA algorithm on quantum annealers with applications in areas of bioinformatics and genetic sequencing. To understand the human genome, researchers compare extensive sets of these genetic sequences -- or their protein…

Quantum Physics · Physics 2024-03-28 Melody Lee

Our understanding of the physics of biological molecules, such as proteins and DNA, is limited because the approximations we usually apply to model inert materials are not in general applicable to soft, chemically inhomogeneous systems. The…

Quantum Physics · Physics 2010-07-13 Sarah Harris , Vivien M. Kendon