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Graph neural networks (GNNs) learn to represent nodes by aggregating information from their neighbors. As GNNs increase in depth, their receptive field grows exponentially, leading to high memory costs. Several existing methods address this…

Machine Learning · Computer Science 2025-07-16 Taraneh Younesian , Daniel Daza , Emile van Krieken , Thiviyan Thanapalasingam , Peter Bloem

Graph neural networks (GNNs) have demonstrated success in modeling relational data, especially for data that exhibits homophily: when a connection between nodes tends to imply that they belong to the same class. However, while this…

Machine Learning · Computer Science 2023-06-23 Andreea Deac , Jian Tang

Graph Neural Networks (GNNs) require a relatively large number of labeled nodes and a reliable/uncorrupted graph connectivity structure in order to obtain good performance on the semi-supervised node classification task. The performance of…

Machine Learning · Computer Science 2021-07-01 Abdullah Alchihabi , Yuhong Guo

Recent advances in Graph Convolutional Networks (GCNs) have led to state-of-the-art performance on various graph-related tasks. However, most existing GCN models do not explicitly identify whether all the aggregated neighbors are valuable…

Machine Learning · Computer Science 2020-09-08 Hao Chen , Yue Xu , Feiran Huang , Zengde Deng , Wenbing Huang , Senzhang Wang , Peng He , Zhoujun Li

Node classification is a fundamental task in graph analysis, with broad applications across various fields. Recent breakthroughs in Large Language Models (LLMs) have enabled LLM-based approaches for this task. Although many studies…

Machine Learning · Computer Science 2025-05-21 Xixi Wu , Yifei Shen , Fangzhou Ge , Caihua Shan , Yizhu Jiao , Xiangguo Sun , Hong Cheng

Multi-label classification (MC) is a standard machine learning problem in which a data point can be associated with a set of classes. A more challenging scenario is given by hierarchical multi-label classification (HMC) problems, in which…

Machine Learning · Computer Science 2022-10-05 Eleonora Giunchiglia , Thomas Lukasiewicz

Heterophily has been considered as an issue that hurts the performance of Graph Neural Networks (GNNs). To address this issue, some existing work uses a graph-level weighted fusion of the information of multi-hop neighbors to include more…

Machine Learning · Computer Science 2023-06-21 Yuhan Chen , Yihong Luo , Jing Tang , Liang Yang , Siya Qiu , Chuan Wang , Xiaochun Cao

Graph neural networks (GNNs) have achieved state-of-the-art performance for node classification on graphs. The vast majority of existing works assume that genuine node labels are always provided for training. However, there has been very…

Machine Learning · Computer Science 2021-03-08 Yayong Li , Jie yin , Ling Chen

Graph neural networks (GNNs) have shown advantages in graph-based analysis tasks. However, most existing methods have the homogeneity assumption and show poor performance on heterophilic graphs, where the linked nodes have dissimilar…

Machine Learning · Computer Science 2024-04-16 Tianhao Peng , Wenjun Wu , Haitao Yuan , Zhifeng Bao , Zhao Pengrui , Xin Yu , Xuetao Lin , Yu Liang , Yanjun Pu

Graph Neural Networks (GNNs) excel in node classification tasks but often assume homophily, where connected nodes share similar labels. This assumption does not hold in many real-world heterophilic graphs. Existing models for heterophilic…

Machine Learning · Computer Science 2025-10-10 Yumeng Wang , Zengyi Wo , Wenjun Wang , Xingcheng Fu , Minglai Shao

We propose AGS-GNN, a novel attribute-guided sampling algorithm for Graph Neural Networks (GNNs) that exploits node features and connectivity structure of a graph while simultaneously adapting for both homophily and heterophily in graphs.…

Machine Learning · Computer Science 2024-05-27 Siddhartha Shankar Das , S M Ferdous , Mahantesh M Halappanavar , Edoardo Serra , Alex Pothen

We show that a modification of the first layer of a Graph Convolutional Network (GCN) can be used to effectively propagate label information across neighbor nodes, for binary and multi-class classification problems. This is done by…

Machine Learning · Computer Science 2021-04-07 Claudio Bellei , Hussain Alattas , Nesrine Kaaniche

Node classification and graph classification are two graph learning problems that predict the class label of a node and the class label of a graph respectively. A node of a graph usually represents a real-world entity, e.g., a user in a…

Social and Information Networks · Computer Science 2022-09-07 Jia Li , Yongfeng Huang , Heng Chang , Yu Rong

Competitive methods for multi-label classification typically invest in learning labels together. To do so in a beneficial way, analysis of label dependence is often seen as a fundamental step, separate and prior to constructing a…

Machine Learning · Statistics 2017-07-19 Jesse Read , Jaakko Hollmén

Graph Convolutional Networks (GCNs) have become a standard approach for semi-supervised node classification, yet practitioners lack clear guidance on when GCNs provide meaningful improvements over simpler baselines. We present a diagnostic…

Machine Learning · Computer Science 2025-12-16 Nischal Subedi , Ember Kerstetter , Winnie Li , Silo Murphy

Prediction of node and graph labels are prominent network science tasks. Data analyzed in these tasks are sometimes related: entities represented by nodes in a higher-level (higher-scale) network can themselves be modeled as networks at a…

Molecular Networks · Quantitative Biology 2021-05-27 Shawn Gu , Meng Jiang , Pietro Hiram Guzzi , Tijana Milenkovic

Graph homophily refers to the phenomenon that connected nodes tend to share similar characteristics. Understanding this concept and its related metrics is crucial for designing effective Graph Neural Networks (GNNs). The most widely used…

Machine Learning · Computer Science 2024-06-28 Yilun Zheng , Sitao Luan , Lihui Chen

Graph Neural Networks (GNNs) are widely used on a variety of graph-based machine learning tasks. For node-level tasks, GNNs have strong power to model the homophily property of graphs (i.e., connected nodes are more similar) while their…

Machine Learning · Computer Science 2022-04-26 Lun Du , Xiaozhou Shi , Qiang Fu , Xiaojun Ma , Hengyu Liu , Shi Han , Dongmei Zhang

Node classification using Graph Neural Networks (GNNs) has been widely applied in various real-world scenarios. However, in recent years, compelling evidence emerges that the performance of GNN-based node classification may deteriorate…

Machine Learning · Computer Science 2022-08-23 Jun Zhuang , Mohammad Al Hasan

Spectral Graph Neural Networks (GNNs) with various graph filters have received extensive affirmation due to their promising performance in graph learning problems. However, it is known that GNNs do not always perform well. Although graph…

Machine Learning · Computer Science 2022-02-18 Zhixian Chen , Tengfei Ma , Yang Wang