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Conditional sampling distributions (CSDs), sometimes referred to as copying models, underlie numerous practical tools in population genomic analyses. Though an important application that has received much attention is the inference of…

Populations and Evolution · Quantitative Biology 2015-03-20 Matthias Steinrücken , Joshua S. Paul , Yun S. Song

We introduce a class of branching processes in which the reproduction or lifetime distribution at a given time depends on the total cumulative number of individuals who have been born in the population until that time. We focus on a…

Probability · Mathematics 2021-12-03 Sophie Hautphenne , Minyuan Li

It is generally accepted that populations are useful for the global exploration of multi-modal optimisation problems. Indeed, several theoretical results are available showing such advantages over single-trajectory search heuristics. In…

Neural and Evolutionary Computing · Computer Science 2019-03-27 Dogan Corus , Pietro S. Oliveto

We study the effect of mutations in a simple model of colonization, based on Montecarlo simulations. When the population colonizes the whole available habitat, a maximum population density is reached, which depends on the mutation rate.…

Populations and Evolution · Quantitative Biology 2009-11-10 R. Huerta-Quintanilla , M. Rodriguez-Achach

Evolution occurs in populations of reproducing individuals. In stochastic descriptions of evolutionary dynamics, such as the Moran process, individuals are chosen randomly for birth and for death. If the same type is chosen for both steps,…

Populations and Evolution · Quantitative Biology 2026-01-13 Michal Pecho , Josef Tkadlec , Martin A. Nowak

We study the combined effects of periodically varying carrying capacity and survival rates on the fish population in the ocean (sea). We introduce the Getz type delay differential equation model with a control parameter which describes how…

Dynamical Systems · Mathematics 2007-05-23 L. Berezansky , L. Idels

We consider a model of a population with fixed size $N$, which is subjected to an unlimited supply of beneficial mutations at a constant rate $\mu_N$. Individuals with $k$ beneficial mutations have the fitness $(1+s_N)^k$. Each individual…

Probability · Mathematics 2024-12-30 Nantawat Udomchatpitak , Jason Schweinsberg

A central problem in the study of human mobility is that of migration systems. Typically, migration systems are defined as a set of relatively stable movements of people between two or more locations over time. While these emergent systems…

Applications · Statistics 2024-11-08 Zack W. Almquist , Tri Duc Nguyen , Mikael Sorensen , Xiao Fu , Nicholas D. Sidiropoulos

The prevalence of sexual reproduction ("sex") in eukaryotes is an enigma of evolutionary biology. Sex increases genetic variation only tells its long-term superiority in essence. The accumulation of harmful mutations causes an immediate and…

Populations and Evolution · Quantitative Biology 2013-08-01 Xiang-Ping Jia , Hong Sun

We consider a model of stationary population with random size given by a continuous state branching process with immigration with a quadratic branching mechanism. We give an exact elementary simulation procedure of the genealogical tree of…

Probability · Mathematics 2020-02-05 Jean-François Delmas , Romain Abraham

A time- and space-discrete model for the growth of a rapidly saturating local biological population $N(x,t)$ is derived from a hierarchical random deposition process previously studied in statistical physics. Two biologically relevant…

Biological Physics · Physics 2009-11-07 J. O. Indekeu , K. Sznajd-Weron

In order to understand how the combination of domain evolution and impulsive harvesting affect the dynamics of a population, we propose a diffusive logistic population model with impulsive harvesting on a periodically evolving domain.…

Analysis of PDEs · Mathematics 2021-09-22 Yue Meng , Zhigui Lin , Michael Pedersen

We consider several one-species population dynamics model with finite and infinite carrying capacity, time dependent growth and effort rates and solve them analytically. We show that defining suitable scaling functions for a given time, one…

Disordered Systems and Neural Networks · Physics 2011-11-14 Alexandre Souto Martinez , Brenno Caetano Trocca Cabella , Fabiano Ribeiro

We study a dynamic model of ecosystems where immigration plays an essential role both in assembling the species community and in mantaining its biodiversity. This framework is particularly relevant for insular ecosystems. Population…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 U. Bastolla , M. Laessig , S. Manrubia , A. Valleriani

We consider a population distributed between two habitats, in each of which it experiences a growth rate that switches periodically between two values, $1- \varepsilon > 0$ or $ - (1 + \varepsilon) < 0$. We study the specific case where the…

Dynamical Systems · Mathematics 2024-02-21 Michel Benaïm , Claude Lobry , Tewfik Sari , Edouard Strickler

In an extant population, how much information do extant individuals provide on the pedigree of their ancestors? Recent work by Kim, Mossel, Ramnarayan and Turner (2020) studied this question under a number of simplifying assumptions,…

Populations and Evolution · Quantitative Biology 2022-11-29 Elchanan Mossel , David Vulakh

This paper considers a nonlinear model for population dynamics with age structure. The fertility rate with respect to age is non constant and has the form proposed by [17]. Moreover, its multiplicative structure and the multiplicative…

General Mathematics · Mathematics 2023-12-06 Dragos-Patru Covei , Traian A. Pirvu , Catalin Sterbeti

We consider continuous space-time decay-surge population models which are semi- stochastic processes for which deterministically declining populations, bound to fade away, are rein- vigorated at random times by bursts or surges of random…

Probability · Mathematics 2021-11-09 Branda Goncalves , Thierry Huillet , Eva Löcherbach

Near critical catalyst-reactant branching processes with controlled immigration are studied. The reactant population evolves according to a branching process whose branching rate is proportional to the total mass of the catalyst. The bulk…

Probability · Mathematics 2013-09-06 Amarjit Budhiraja , Dominik Reinhold

In this paper we study the following one-dimensional reaction-diffusion problem $$ u_t+(-\Delta)^s u=f(x-c t, u) \;\:\textrm{ in } \mathbb{R}\times (0,+\infty), $$ where $s>\frac{1}{2}$, $c \in \mathbb{R}$ is a prescribed velocity, and $f$…

Analysis of PDEs · Mathematics 2025-09-29 Sebastián Flores-Sepúlveda , Gabrielle Nornberg , Alexander Quaas
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