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Recurrent neural networks (RNNs) are omnipresent in sequence modeling tasks. Practical models usually consist of several layers of hundreds or thousands of neurons which are fully connected. This places a heavy computational and memory…

Machine Learning · Computer Science 2019-05-30 Matthijs Van Keirsbilck , Alexander Keller , Xiaodong Yang

One of the main goals of developmental biology is to reveal the gene regulatory networks (GRNs) underlying the robust differentiation of multipotent progenitors into precisely specified cell types. Most existing methods to infer GRNs from…

Quantitative Methods · Quantitative Biology 2024-01-23 Maria Mircea , Diego Garlaschelli , Stefan Semrau

Establishing a docker-based replicability infrastructure offers the community a great opportunity: measuring the run time of information retrieval systems. The time required to present query results to a user is paramount to the users…

Information Retrieval · Computer Science 2019-07-11 Sebastian Hofstätter , Allan Hanbury

One of the major challenges in neuroscience is to determine how noise that is present at the molecular and cellular levels affects dynamics and information processing at the macroscopic level of synaptically coupled neuronal populations.…

Disordered Systems and Neural Networks · Physics 2014-06-12 Paul C. Bressloff , Jay M. Newby

A population of firing neurons is expected to carry information not only by mean firing rate but also by fluctuation and synchrony among neurons. In order to examine this possibility, we have studied responses of neuronal ensembles to three…

Neurons and Cognition · Quantitative Biology 2009-11-13 Hideo Hasegawa

In this article, we review the literature on statistical theories of neural networks from three perspectives: approximation, training dynamics and generative models. In the first part, results on excess risks for neural networks are…

Machine Learning · Statistics 2024-09-17 Namjoon Suh , Guang Cheng

The continuous integration of experimental data into coherent models of the brain is an increasing challenge of modern neuroscience. Such models provide a bridge between structure and activity, and identify the mechanisms giving rise to…

Neurons and Cognition · Quantitative Biology 2017-03-03 Jannis Schuecker , Maximilian Schmidt , Sacha J. van Albada , Markus Diesmann , Moritz Helias

Large-scale electrophysiological recordings now allow simultaneous monitoring of thousands of neurons across multiple brain regions, revealing structured variability in neural population activity. Understanding how these collective patterns…

Neurons and Cognition · Quantitative Biology 2026-03-12 Nicolas Béreux , Giovanni Catania , Aurélien Decelle , Francesca Mignacco , Alfonso de Jesús Navas Gómez , Beatriz Seoane

Tremendous progress has been made in sequential processing with the recent advances in recurrent neural networks. However, recurrent architectures face the challenge of exploding/vanishing gradients during training, and require significant…

Neural and Evolutionary Computing · Computer Science 2021-10-13 Bing Han , Cheng Wang , Kaushik Roy

Current neural network models of primate vision focus on replicating overall levels of behavioral accuracy, often neglecting perceptual decisions' rich, dynamic nature. Here, we introduce a novel computational framework to model the…

Artificial Intelligence · Computer Science 2024-12-30 Yu-Ang Cheng , Ivan Felipe Rodriguez , Sixuan Chen , Kohitij Kar , Takeo Watanabe , Thomas Serre

Many neural networks exhibit stability in their activation patterns over time in response to inputs from sensors operating under real-world conditions. By capitalizing on this property of natural signals, we propose a Recurrent Neural…

Neural and Evolutionary Computing · Computer Science 2016-12-19 Daniel Neil , Jun Haeng Lee , Tobi Delbruck , Shih-Chii Liu

A major problem of machine-learning approaches in structural dynamics is the frequent lack of structural data. Inspired by the recently-emerging field of population-based structural health monitoring (PBSHM), and the use of transfer…

Machine Learning · Computer Science 2023-02-17 G. Tsialiamanis , N. Dervilis , D. J. Wagg , K. Worden

Traditional artificial neural networks consist of nodes with non-oscillatory dynamics. Biological neural networks, on the other hand, consist of oscillatory components embedded in an oscillatory environment. Motivated by this feature of…

Neurons and Cognition · Quantitative Biology 2026-03-17 Mark A. Kramer

The combination of new recording techniques in neuroscience and powerful inference methods recently held the promise to recover useful effective models, at the single neuron or network level, directly from observed data. The value of a…

Neurons and Cognition · Quantitative Biology 2018-04-09 Cristiano Capone , Guido Gigante , Paolo Del Giudice

Robotic navigation through crowds or herds requires the ability to both predict the future motion of nearby individuals and understand how these predictions might change in response to a robot's future action. State of the art trajectory…

Artificial Intelligence · Computer Science 2020-01-29 Stuart Eiffert , Salah Sukkarieh

In this work, we propose to catch the complexity of the membrane potential's dynamic of a motoneuron between its spikes, taking into account the spikes from other neurons around. Our approach relies on two types of data: extracellular…

Statistics Theory · Mathematics 2021-08-03 Anna Bonnet , Charlotte Dion , François Gindraud , Sarah Lemler

Reservoir computers (RCs) provide a computationally efficient alternative to deep learning while also offering a framework for incorporating brain-inspired computational principles. By using an internal neural network with random, fixed…

Neural and Evolutionary Computing · Computer Science 2025-04-18 Keshav Srinivasan , Dietmar Plenz , Michelle Girvan

Our ability to use deep learning approaches to decipher neural activity would likely benefit from greater scale, in terms of both model size and datasets. However, the integration of many neural recordings into one unified model is…

Neural networks are complex algorithms that loosely model the behaviour of the human brain. They play a significant role in computational neuroscience and artificial intelligence. The next generation of neural network models is based on the…

Neural and Evolutionary Computing · Computer Science 2020-05-29 Ifeatu Ezenwe , Alok Joshi , KongFatt Wong-Lin

Maximum entropy models are the least structured probability distributions that exactly reproduce a chosen set of statistics measured in an interacting network. Here we use this principle to construct probabilistic models which describe the…

Neurons and Cognition · Quantitative Biology 2014-01-28 Gašper Tkačik , Olivier Marre , Dario Amodei , Elad Schneidman , William Bialek , Michael J Berry
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