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The proliferation of large-scale and structurally complex data has spurred the integration of machine learning methods into statistical modeling. Recurrent neural networks (RNNs), a foundational class of models for time-dependent data, can…

Machine Learning · Statistics 2026-05-05 Yuxi Cai , Lan Li , Feiqing Huang , Guodong Li

A central aim in computational neuroscience is to relate the activity of large populations of neurons to an underlying dynamical system. Models of these neural dynamics should ideally be both interpretable and fit the observed data well.…

Machine Learning · Computer Science 2025-02-27 Matthijs Pals , A Erdem Sağtekin , Felix Pei , Manuel Gloeckler , Jakob H Macke

An emerging paradigm proposes that neural computations can be understood at the level of dynamical systems that govern low-dimensional trajectories of collective neural activity. How the connectivity structure of a network determines the…

Neurons and Cognition · Quantitative Biology 2021-05-28 Manuel Beiran , Alexis Dubreuil , Adrian Valente , Francesca Mastrogiuseppe , Srdjan Ostojic

Primates display a marked ability to learn habits in uncertain and dynamic environments. The associated perceptions and actions of such habits engage distributed neural circuits. Yet, precisely how such circuits support the computations…

Neurons and Cognition · Quantitative Biology 2020-06-26 Karol P. Szymula , Fabio Pasqualetti , Ann M. Graybiel , Theresa M. Desrochers , Danielle S. Bassett

Dynamics play a critical role in computation. The principled evolution of states over time enables both biological and artificial networks to represent and integrate information to make decisions. In the past few decades, significant…

Neurons and Cognition · Quantitative Biology 2023-11-28 Jason Z. Kim , Bart Larsen , Linden Parkes

Population-based learning paradigms, including evolutionary strategies, Population-Based Training (PBT), and recent model-merging methods, combine fast within-model optimisation with slower population-level adaptation. Despite their…

Machine Learning · Computer Science 2026-03-26 Giacomo Borghi , Hyesung Im , Lorenzo Pareschi

Can Spiking Neural Networks (SNNs) approximate the dynamics of Recurrent Neural Networks (RNNs)? Arguments in classical mean-field theory based on laws of large numbers provide a positive answer when each neuron in the network has many…

Neurons and Cognition · Quantitative Biology 2024-11-08 Valentin Schmutz , Johanni Brea , Wulfram Gerstner

Conventionally, information is represented by spike rates in the neural system. Here, we consider the ability of temporally modulated activities in neuronal networks to carry information extra to spike rates. These temporal modulations,…

Neurons and Cognition · Quantitative Biology 2014-09-09 C. C. Alan Fung , He Wang , Kin Lam , K. Y. Michael Wong , Si Wu

We propose a probabilistic framework for developing computational models of biological neural systems. In this framework, physiological recordings are viewed as discrete-time partial observations of an underlying continuous-time stochastic…

Neurons and Cognition · Quantitative Biology 2026-02-10 Ahmed ElGazzar , Marcel van Gerven

Fifty years ago, Wilson and Cowan developed a mathematical model to describe the activity of neural populations. In this seminal work, they divided the cells in three groups: active, sensitive and refractory, and obtained a dynamical system…

Neurons and Cognition · Quantitative Biology 2022-09-07 Vincent Painchaud , Nicolas Doyon , Patrick Desrosiers

Feed-forward convolutional neural networks (CNNs) are currently state-of-the-art for object classification tasks such as ImageNet. Further, they are quantitatively accurate models of temporally-averaged responses of neurons in the primate…

Neurons and Cognition · Quantitative Biology 2018-10-30 Aran Nayebi , Daniel Bear , Jonas Kubilius , Kohitij Kar , Surya Ganguli , David Sussillo , James J. DiCarlo , Daniel L. K. Yamins

Predictive models in acute care settings must be able to immediately recognize precipitous changes in a patient's status when presented with data reflecting such changes. Recurrent neural networks (RNNs) have become common for training and…

Machine Learning · Computer Science 2020-07-30 David Ledbetter , Eugene Laksana , Melissa Aczon , Randall Wetzel

Recurrent neural networks (RNNs) are widely used in computational neuroscience and machine learning applications. In an RNN, each neuron computes its output as a nonlinear function of its integrated input. While the importance of RNNs,…

Neurons and Cognition · Quantitative Biology 2012-07-10 Sebastian Bitzer , Stefan J. Kiebel

Neural population activity relating to behaviour is assumed to be inherently low-dimensional despite the observed high dimensionality of data recorded using multi-electrode arrays. Therefore, predicting behaviour from neural population…

Neurons and Cognition · Quantitative Biology 2022-02-17 Justin Jude , Matthew G Perich , Lee E Miller , Matthias H Hennig

Neural populations exhibit complex recurrent structures that drive behavior, while continuously receiving and integrating external inputs from sensory stimuli, upstream regions, and neurostimulation. However, neural populations are often…

Neurons and Cognition · Quantitative Biology 2025-09-24 Parsa Vahidi , Omid G. Sani , Maryam M. Shanechi

Recent advances in experimental techniques enable the simultaneous recording of activity from thousands of neurons in the brain, presenting both an opportunity and a challenge: to build meaningful, scalable models of large neural…

Biological Physics · Physics 2025-08-05 Luca Di Carlo , Francesca Mignacco , Christopher W. Lynn , William Bialek

Sequential dynamics are a key feature of many modern recommender systems, which seek to capture the `context' of users' activities on the basis of actions they have performed recently. To capture such patterns, two approaches have…

Information Retrieval · Computer Science 2018-08-30 Wang-Cheng Kang , Julian McAuley

Recurrent Neural Networks (RNNs) are powerful models for sequential data that have the potential to learn long-term dependencies. However, they are computationally expensive to train and difficult to parallelize. Recent work has shown that…

Machine Learning · Statistics 2015-10-07 César Laurent , Gabriel Pereyra , Philémon Brakel , Ying Zhang , Yoshua Bengio

Recurrent neural networks (RNNs) have yielded promising results for both recognizing objects in challenging conditions and modeling aspects of primate vision. However, the representational dynamics of recurrent computations remain poorly…

Computer Vision and Pattern Recognition · Computer Science 2023-10-13 Sushrut Thorat , Adrien Doerig , Tim C. Kietzmann

An open question in systems and computational neuroscience is how neural circuits accumulate evidence towards a decision. Fitting models of decision-making theory to neural activity helps answer this question, but current approaches limit…

Neurons and Cognition · Quantitative Biology 2020-01-15 David M. Zoltowski , Jonathan W. Pillow , Scott W. Linderman