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By providing a framework of accounting for the shared ancestry inherent to all life, phylogenetics is becoming the statistical foundation of biology. The importance of model choice continues to grow as phylogenetic models continue to…

Populations and Evolution · Quantitative Biology 2019-02-05 Jamie R. Oaks , Kerry A. Cobb , Vladimir N. Minin , Adam D. Leaché

The United Nations has identified improving food security and reducing hunger as essential components of its sustainable development goals. As of 2021, approximately 828 million people worldwide are experiencing hunger and malnutrition,…

Hundreds of Evolutionary Computation approaches have been reported. From an evolutionary perspective they focus on two fundamental mechanisms: cultural inheritance in Swarm Intelligence and genetic inheritance in Evolutionary Algorithms.…

Neural and Evolutionary Computing · Computer Science 2022-11-28 Sizhe Yuen , Thomas H. G. Ezard , Adam J. Sobey

The production of food, feed, fiber, and fuel is a key task of agriculture, which has to cope with many challenges in the upcoming decades, e.g., a higher demand, climate change, lack of workers, and the availability of arable land. Vision…

Computer Vision and Pattern Recognition · Computer Science 2024-07-25 Jan Weyler , Federico Magistri , Elias Marks , Yue Linn Chong , Matteo Sodano , Gianmarco Roggiolani , Nived Chebrolu , Cyrill Stachniss , Jens Behley

The grand challenges in biology today are being shaped by powerful high-throughput technologies that have revealed the genomes of many organisms, global expression patterns of genes and detailed information about variation within…

Statistics Theory · Mathematics 2007-06-13 Lior Pachter , Bernd Sturmfels

Identifying individual animals is crucial for many biological investigations. In response to some of the limitations of current identification methods, new automated computer vision approaches have emerged with strong performance. Here, we…

Computer Vision and Pattern Recognition · Computer Science 2021-12-22 Maxime Vidal , Nathan Wolf , Beth Rosenberg , Bradley P. Harris , Alexander Mathis

The rapid growth of the global population and the continuous decline in cultivable land pose significant threats to food security. This challenge worsens as climate change further reduces the availability of farmland. Soilless agriculture,…

Signal Processing · Electrical Eng. & Systems 2025-04-12 Monica Dutta , Deepali Gupta , Sumegh Tharewal , Deepam Goyal , Jasminder Kaur Sandhu , Manjit Kaur , Ahmad Ali Alzubi , Jazem Mutared Alanazi

Molecular traits, such as gene expression levels or protein binding affinities, are increasingly accessible to quantitative measurement by modern high-throughput techniques. Such traits measure molecular functions and, from an evolutionary…

Populations and Evolution · Quantitative Biology 2013-11-15 Armita Nourmohammad , Torsten Held , Michael Lässig

Bioacoustics, the study of sounds produced by living organisms, plays a vital role in conservation, biodiversity monitoring, and behavioral studies. Many tasks in this field, such as species, individual, and behavior classification and…

Adapting to task changes without forgetting previous knowledge is a key skill for intelligent systems, and a crucial aspect of lifelong learning. Swarm controllers, however, are typically designed for specific tasks, lacking the ability to…

Neural and Evolutionary Computing · Computer Science 2025-03-25 Lorenzo Leuzzi , Simon Jones , Sabine Hauert , Davide Bacciu , Andrea Cossu

The population explosion of the 21st century has adversely affected the natural resources with restricted availability of cultivable land, increased average temperatures due to global warming, and carbon footprint resulting in a drastic…

Artificial Intelligence · Computer Science 2022-02-23 Md. Mahadi Hasan , Muhammad Usama Islam , Muhammad Jafar Sadeq

A crop can be represented as a biotechnical system in which components are either chosen (cultivar, management) or given (soil, climate) and whose combination generates highly variable stress patterns and yield responses. Here, we used…

Populations and Evolution · Quantitative Biology 2014-03-13 Pierre Casadebaig , Ronan Trépos , Victor Picheny , Nicolas B. Langlade , Patrick Vincourt , Philippe Debaeke

Poaching poses significant threats to wildlife and biodiversity. A valuable step in reducing poaching is to forecast poacher behavior, which can inform patrol planning and other conservation interventions. Existing poaching prediction…

Machine Learning · Computer Science 2025-08-29 Lingkai Kong , Haichuan Wang , Charles A. Emogor , Vincent Börsch-Supan , Lily Xu , Milind Tambe

Unraveling the evolutionary forces shaping bacterial diversity can today be tackled using a growing amount of genomic data. While the genome of eukaryotes is highly stable, bacterial genomes from cells of the same species highly vary in…

Populations and Evolution · Quantitative Biology 2015-03-19 Franz Baumdicker , Peter Pfaffelhuber

In recent times, wireless access technology is becoming increasingly commonplace due to the ease of operation and installation of untethered wireless media. The design of wireless networking is challenging due to the highly dynamic…

Networking and Internet Architecture · Computer Science 2014-11-20 Usama Mehboob , Junaid Qadir , Salman Ali , Athanasios Vasilakos

Bioinformatics has witnessed a paradigm shift with the increasing integration of artificial intelligence (AI), particularly through the adoption of foundation models (FMs). These AI techniques have rapidly advanced, addressing historical…

Quantitative Methods · Quantitative Biology 2024-02-08 Qing Li , Zhihang Hu , Yixuan Wang , Lei Li , Yimin Fan , Irwin King , Le Song , Yu Li

Dairy farming plays an important role in agriculture for thousands of years not only in Sri Lanka but also in so many other countries. When it comes to dairy farming cattle is an indispensable animal. According to the literature surveys…

Foraging site constancy, or repeated return to the same foraging location, is a foraging strategy used by many species to decrease uncertainty, but it is often unclear exactly how the foraging site is identified. Here we focus on the…

Populations and Evolution · Quantitative Biology 2025-03-27 Sarah A. MacQueen , Clara F. Hardy , W. John Braun , Rebecca C. Tyson

The amount of completely sequenced chloroplast genomes increases rapidly every day, leading to the possibility to build large-scale phylogenetic trees of plant species. Considering a subset of close plant species defined according to their…

Artificial Intelligence · Computer Science 2016-09-01 Bassam AlKindy , Bashar Al-Nuaimi , Christophe Guyeux , Jean-François Couchot , Michel Salomon , Reem Alsrraj , Laurent Philippe

One of the classical questions in evolutionary biology is how evolutionary processes are coupled at the gene and species level. With this motivation, we compare the topological properties (mainly the depth scaling, as a characterization of…

Populations and Evolution · Quantitative Biology 2011-07-26 E. Alejandro Herrada , Víctor M. Eguíluz , Emilio Hernández-García , Carlos M. Duarte