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The Cellular Potts Model (CPM) is a widely used simulation paradigm for systems of interacting cells that has been used to study scenarios ranging from plant development to morphogenesis, tumour growth and cell migration. Despite their wide…

Tissues and Organs · Quantitative Biology 2023-12-18 Shabaz Sultan , Sapna Devi , Scott N. Mueller , Johannes Textor

Parallel dataflow systems are a central part of most analytic pipelines for big data. The iterative nature of many analysis and machine learning algorithms, however, is still a challenge for current systems. While certain types of bulk…

Databases · Computer Science 2012-08-02 Stephan Ewen , Kostas Tzoumas , Moritz Kaufmann , Volker Markl

Finding the ground states of the Ising Hamiltonian [1] maps to various combinatorial optimization problems in biology, medicine, wireless communications, artificial intelligence, and social network. So far no efficient classical and quantum…

Quantum Physics · Physics 2014-10-30 Alireza Marandi , Zhe Wang , Kenta Takata , Robert L. Byer , Yoshihisa Yamamoto

We present a parallel machine, based on programmable devices, dedicated to simulate spin glass models with Z2 variables and short range interaction. A working prototype is described for two lattices containing 312x312 spins each with an…

High Energy Physics - Lattice · Physics 2009-10-28 J. Pech , A. Tarancon , C. L. Ullod

Real-world experiments involve batched & delayed feedback, non-stationarity, multiple objectives & constraints, and (often some) personalization. Tailoring adaptive methods to address these challenges on a per-problem basis is infeasible,…

Machine Learning · Computer Science 2024-11-11 Ethan Che , Daniel R. Jiang , Hongseok Namkoong , Jimmy Wang

We present a framework to prepare superpositions of bit strings, i.e., many-body spin configurations, with deterministic programmable probabilities. The spin configurations are encoded in the degenerate ground states of the lattice-gauge…

Quantum Physics · Physics 2018-06-06 Lukas M. Sieberer , Wolfgang Lechner

A key ingredient to achieving intelligent behavior is physical understanding that equips robots with the ability to reason about the effects of their actions in a dynamic environment. Several methods have been proposed to learn dynamics…

Robotics · Computer Science 2020-01-24 David Millard , Eric Heiden , Shubham Agrawal , Gaurav S. Sukhatme

Traditional methods for unsupervised learning of finite mixture models require to evaluate the likelihood of all components of the mixture. This becomes computationally prohibitive when the number of components is large, as it is, for…

Machine Learning · Computer Science 2021-10-12 Milan Papež , Tomáš Pevný , Václav Šmídl

Imitation Learning (IL) is an appealing approach to learn desirable autonomous behavior. However, directing IL to achieve arbitrary goals is difficult. In contrast, planning-based algorithms use dynamics models and reward functions to…

Machine Learning · Computer Science 2019-10-02 Nicholas Rhinehart , Rowan McAllister , Sergey Levine

In this article, a new generic higher-order finite-element framework for massively parallel simulations is presented. The modular software architecture is carefully designed to exploit the resources of modern and future supercomputers.…

Mathematical Software · Computer Science 2018-05-28 Nils Kohl , Dominik Thönnes , Daniel Drzisga , Dominik Bartuschat , Ulrich Rüde

Monte Carlo simulations are methods for simulating statistical systems. The aim is to generate a representative ensemble of configurations to access thermodynamical quantities without the need to solve the system analytically or to perform…

Statistical Mechanics · Physics 2015-06-19 Jean-Charles Walter , Gerard Barkema

Many combinatorial optimization problems can be reformulated as finding the ground state of the Ising model. Existing Ising solvers are mostly inspired by simulated annealing. Although annealing techniques offer scalability, they lack…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-11 Debraj Banerjee , Santanu Mahapatra , Kunal Narayan Chaudhury

Differentiable programming allows for derivatives of functions implemented via computer code to be calculated automatically. These derivatives are calculated using automatic differentiation (AD). This thesis explores two applications of…

Plasma Physics · Physics 2024-10-16 Nick McGreivy

We review different aspects of the simulation of spiking neural networks. We start by reviewing the different types of simulation strategies and algorithms that are currently implemented. We next review the precision of those simulation…

We adapted the SWAP molecular dynamics algorithm for use in lattice Ising spin models. We dressed the spins with a randomly distributed length and we alternated long-range spin exchanges with conventional single spin flip Monte Carlo…

Statistical Mechanics · Physics 2025-10-14 Greivin Alfaro Miranda , Leticia F. Cugliandolo , Marco Tarzia

Many combinatorial problems can be mapped to Ising machines, i.e., networks of coupled oscillators that settle to a minimum-energy ground state, from which the problem solution is inferred. This work proposes DROID, a novel event-driven…

Emerging Technologies · Computer Science 2025-02-27 Abhimanyu Kumar , Ramprasath S. , Chris H. Kim , Ulya R. Karpuzcu , Sachin S. Sapatnekar

We describe how to apply adjoint sensitivity methods to backward Monte-Carlo schemes arising from simulations of particles passing through matter. Relying on this, we demonstrate derivative based techniques for solving inverse problems for…

Computational Physics · Physics 2022-05-11 Roland Grinis

We propose Differentiable Satisfiability and Differentiable Answer Set Programming (Differentiable SAT/ASP) for multi-model optimization. Models (answer sets or satisfying truth assignments) are sampled using a novel SAT/ASP solving…

Artificial Intelligence · Computer Science 2019-01-01 Matthias Nickles

Accurate simulation of soft mechanisms under dynamic actuation is critical for the design of soft robots. We address this gap with our differentiable simulation tool by learning the material parameters of our soft robotic fish. On the…

Learning robust and generalizable world models is crucial for enabling efficient and scalable robotic control in real-world environments. In this work, we introduce a novel framework for learning world models that accurately capture…

Robotics · Computer Science 2025-12-16 Chenhao Li , Andreas Krause , Marco Hutter
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