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Estimating a directed acyclic graph (DAG) from observational data represents a canonical learning problem and has generated a lot of interest in recent years. Research has focused mostly on the following two cases: when no information…

Applications · Statistics 2019-02-15 Syed Rahman , Kshitij Khare , George Michailidis , Carlos Martinez , Juan Carulla

Given $n$ points in the plane, we propose algorithms to compile connected crossing-free geometric graphs into directed acyclic graphs (DAGs). The DAGs allow efficient counting, enumeration, random sampling, and optimization. Our algorithms…

Computational Geometry · Computer Science 2020-01-27 Yu Nakahata , Takashi Horiyama , Shin-ichi Minato , Katsuhisa Yamanaka

Ancestral graphs can encode conditional independence relations that arise in directed acyclic graph (DAG) models with latent and selection variables. However, for any ancestral graph, there may be several other graphs to which it is Markov…

Statistics Theory · Mathematics 2009-08-26 R. Ayesha Ali , Thomas S. Richardson , Peter Spirtes

The use of directed acyclic graphs (DAGs) to represent conditional independence relations among random variables has proved fruitful in a variety of ways. Recursive structural equation models are one kind of DAG model. However,…

Artificial Intelligence · Computer Science 2013-02-21 Peter L. Spirtes

Graph-structured data ubiquitously appears in science and engineering. Graph neural networks (GNNs) are designed to exploit the relational inductive bias exhibited in graphs; they have been shown to outperform other forms of neural networks…

Machine Learning · Computer Science 2021-02-03 Veronika Thost , Jie Chen

We consider supervised learning problems where the features are embedded in a graph, such as gene expressions in a gene network. In this context, it is of much interest to automatically select a subgraph with few connected components; by…

Machine Learning · Statistics 2013-09-20 Julien Mairal , Bin Yu

Directed acyclic graphs (DAGs) constitute a central modeling tool to enable principled reasoning about cause-effect interactions in complex systems. However, since the causal structure underlying a group of variables is often unknown and…

Machine Learning · Statistics 2026-05-25 Gonzalo Mateos , Samuel Rey , Hamed Ajorlou , Mariano Tepper

Optimization of directed acyclic graph (DAG) structures has many applications, such as neural architecture search (NAS) and probabilistic graphical model learning. Encoding DAGs into real vectors is a dominant component in most…

Machine Learning · Computer Science 2022-12-14 Zehao Dong , Muhan Zhang , Fuhai Li , Yixin Chen

Semantic representations in the form of directed acyclic graphs (DAGs) have been introduced in recent years, and to model them, we need probabilistic models of DAGs. One model that has attracted some attention is the DAG automaton, but it…

Formal Languages and Automata Theory · Computer Science 2019-04-09 Ieva Vasiljeva , Sorcha Gilroy , Adam Lopez

The graph of overlapping permutations is a directed graph that is an analogue to the De Bruijn graph. It consists of vertices that are permutations of length $n$ and edges that are permutations of length $n+1$ in which an edge $a_1\cdots…

Combinatorics · Mathematics 2016-09-09 John Asplund , N. Bradley Fox

Several real problems ranging from text classification to computational biology are characterized by hierarchical multi-label classification tasks. Most of the methods presented in literature focused on tree-structured taxonomies, but only…

Artificial Intelligence · Computer Science 2014-06-19 Giorgio Valentini

Causal graphs, such as directed acyclic graphs (DAGs) and partial ancestral graphs (PAGs), represent causal relationships among variables in a model. Methods exist for learning DAGs and PAGs from data and for converting DAGs to PAGs.…

Machine Learning · Statistics 2018-01-19 Nishant Subramani

Funnels are a new natural subclass of DAGs. Intuitively, a DAG is a funnel if every source-sink path can be uniquely identified by one of its arcs. Funnels are an analog to trees for directed graphs that is more restrictive than DAGs but…

Data Structures and Algorithms · Computer Science 2018-02-01 Marcelo Garlet Millani , Hendrik Molter , Rolf Niedermeier , Manuel Sorge

The overlap graphs of subtrees in a tree (SOGs) generalise many other graphs classes with set representation characterisations. The complexity of recognising SOGs in open. The complexities of recognising many subclasses of SOGs are known.…

Computational Complexity · Computer Science 2022-02-04 Jessica Enright , Martin Pergel

We give an algebraic presentation of directed acyclic graph structure, introducing a symmetric monoidal equational theory whose free PROP we characterise as that of finite abstract dags with input/output interfaces. Our development provides…

Category Theory · Mathematics 2013-03-05 Marcelo Fiore , Marco Devesas Campos

The study of mutual visibility has traditionally focused on undirected graphs, asking for the maximum number of vertices that can communicate via shortest paths without intermediate interference from other set members. In this paper, we…

Combinatorics · Mathematics 2026-02-06 Vanja Stojanović

Directed acyclic graphs whose nodes are all the divisors of a positive integer $n$ and arcs $(a,b)$ defined by $a$ divides $b$ are considered. Fourteen graph invariants such as order, size, and the number of paths are investigated for two…

Number Theory · Mathematics 2014-05-22 Sung-Hyuk Cha , Edgar G. DuCasse , Louis V. Quintas

Estimating the structure of directed acyclic graphs (DAGs) of features (variables) plays a vital role in revealing the latent data generation process and providing causal insights in various applications. Although there have been many…

Machine Learning · Computer Science 2024-03-06 Shaohua Fan , Shuyang Zhang , Xiao Wang , Chuan Shi

We consider construction of the suffix tree and the directed acyclic word graph (DAWG) indexing data structures for a collection $\mathcal{T}$ of texts, where a new symbol may be appended to any text in $\mathcal{T} = \{T_1, \ldots, T_K\}$,…

Data Structures and Algorithms · Computer Science 2018-07-13 Takuya Takagi , Shunsuke Inenaga , Hiroki Arimura , Dany Breslauer , Diptarama Hendrian

We consider the problem of estimating the differences between two causal directed acyclic graph (DAG) models with a shared topological order given i.i.d. samples from each model. This is of interest for example in genomics, where changes in…

Methodology · Statistics 2018-11-08 Yuhao Wang , Chandler Squires , Anastasiya Belyaeva , Caroline Uhler
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