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Traditional text classification techniques in clinical domain have heavily relied on the manually extracted textual cues. This paper proposes a generally supervised machine learning method that is equally hassle-free and does not use…

Computation and Language · Computer Science 2018-08-15 Liu Man

Document information extraction tasks performed by humans create data consisting of a PDF or document image input, and extracted string outputs. This end-to-end data is naturally consumed and produced when performing the task because it is…

Computation and Language · Computer Science 2021-04-26 Rasmus Berg Palm , Florian Laws , Ole Winther

Information Extraction (IE) from document images is challenging due to the high variability of layout formats. Deep models such as LayoutLM and BROS have been proposed to address this problem and have shown promising results. However, they…

Computer Vision and Pattern Recognition · Computer Science 2023-11-27 Abhishek Singh , Venkatapathy Subramanian , Ayush Maheshwari , Pradeep Narayan , Devi Prasad Shetty , Ganesh Ramakrishnan

Machine learning models depend on the quality of input data. As electronic health records are widely adopted, the amount of data in health care is growing, along with complaints about the quality of medical notes. We use two prediction…

Computation and Language · Computer Science 2020-12-10 Chao-Chun Hsu , Shantanu Karnwal , Sendhil Mullainathan , Ziad Obermeyer , Chenhao Tan

Fine-grained sentiment analysis is receiving increasing attention in recent years. Extracting opinion target expressions (OTE) in reviews is often an important step in fine-grained, aspect-based sentiment analysis. Retrieving this…

Computation and Language · Computer Science 2017-09-20 Soufian Jebbara , Philipp Cimiano

In the last few years, many different methods have been focusing on using deep recurrent neural networks for natural language generation. The most widely used sequence-to-sequence neural methods are word-based: as such, they need a…

Machine Learning · Computer Science 2020-05-12 Marco Roberti , Giovanni Bonetta , Rossella Cancelliere , Patrick Gallinari

DNA language models have advanced genomics, but their downstream performance varies widely due to differences in tokenization, pretraining data, and architecture. We argue that a major bottleneck lies in tokenizing sparse and unevenly…

Genomics · Quantitative Biology 2025-12-23 Xiaoxiao Zhou , Zihan Wang , Jingbo Shang , Yang E. Li

Table Extraction (TE) consists in extracting tables from PDF documents, in a structured format which can be automatically processed. While numerous TE tools exist, the variety of methods and techniques makes it difficult for users to choose…

Databases · Computer Science 2025-11-21 Marijan Soric , Cécile Gracianne , Ioana Manolescu , Pierre Senellart

Despite their ubiquity in language generation, it remains unknown why truncation sampling heuristics like nucleus sampling are so effective. We provide a theoretical explanation for the effectiveness of the truncation sampling by proving…

Computation and Language · Computer Science 2023-10-04 Matthew Finlayson , John Hewitt , Alexander Koller , Swabha Swayamdipta , Ashish Sabharwal

Recent advances in machine learning have significantly impacted the field of information extraction, with Language Models (LMs) playing a pivotal role in extracting structured information from unstructured text. Prior works typically…

Computation and Language · Computer Science 2024-10-03 Haolun Wu , Ye Yuan , Liana Mikaelyan , Alexander Meulemans , Xue Liu , James Hensman , Bhaskar Mitra

Recently, Visual Information Extraction (VIE) has been becoming increasingly important in both the academia and industry, due to the wide range of real-world applications. Previously, numerous works have been proposed to tackle this…

Computer Vision and Pattern Recognition · Computer Science 2023-03-30 Zhibo Yang , Rujiao Long , Pengfei Wang , Sibo Song , Humen Zhong , Wenqing Cheng , Xiang Bai , Cong Yao

One essential task in information extraction from the medical corpus is drug name recognition. Compared with text sources come from other domains, the medical text is special and has unique characteristics. In addition, the medical text…

Computation and Language · Computer Science 2016-10-07 Sadikin Mujiono , Mohamad Ivan Fanany , Chan Basaruddin

Translating characters instead of words or word-fragments has the potential to simplify the processing pipeline for neural machine translation (NMT), and improve results by eliminating hyper-parameters and manual feature engineering.…

Computation and Language · Computer Science 2018-08-30 Colin Cherry , George Foster , Ankur Bapna , Orhan Firat , Wolfgang Macherey

Document-level models for information extraction tasks like slot-filling are flexible: they can be applied to settings where information is not necessarily localized in a single sentence. For example, key features of a diagnosis in a…

Computation and Language · Computer Science 2022-05-19 Liyan Tang , Dhruv Rajan , Suyash Mohan , Abhijeet Pradhan , R. Nick Bryan , Greg Durrett

Studies of different term extractors on a corpus of the biomedical domain revealed decreasing performances when applied to highly technical texts. The difficulty or impossibility of customising them to new domains is an additional…

Computation and Language · Computer Science 2007-05-23 Sophie Aubin , Thierry Hamon

Learning word representations has recently seen much success in computational linguistics. However, assuming sequences of word tokens as input to linguistic analysis is often unjustified. For many languages word segmentation is a…

Computation and Language · Computer Science 2013-09-19 Grzegorz Chrupała

Current language models rely on static vocabularies determined at pretraining time, which can lead to decreased performance and increased computational cost for domains underrepresented in the original vocabulary. New tokens can be added to…

Computation and Language · Computer Science 2026-03-16 Konstantin Dobler , Desmond Elliott , Gerard de Melo

With the recent advancements in deep learning, semantic communication which transmits only task-oriented features, has rapidly emerged. However, since feature extraction relies on learning-based models, its performance fundamentally depends…

Signal Processing · Electrical Eng. & Systems 2025-11-19 Sojeong Park , Hyeonho Noh , Hyun Jong Yang

Modern language models mostly take sub-words as input, a design that balances the trade-off between vocabulary size, number of parameters, and performance. However, sub-word tokenization still has disadvantages like not being robust to…

Computation and Language · Computer Science 2022-11-24 Chu-Tak Lee , Qipeng Guo , Xipeng Qiu

In recent years, the employment of deep learning methods has led to several significant breakthroughs in artificial intelligence. Different from traditional machine learning models, deep learning-based approaches are able to extract…

Machine Learning · Computer Science 2023-09-19 Matteo Rizzo , Matteo Marcuzzo , Alessandro Zangari , Andrea Gasparetto , Andrea Albarelli