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Deep pre-trained Transformer models have achieved state-of-the-art results over a variety of natural language processing (NLP) tasks. By learning rich language knowledge with millions of parameters, these models are usually…

Computation and Language · Computer Science 2020-11-10 Zhengyan Zhang , Fanchao Qi , Zhiyuan Liu , Qun Liu , Maosong Sun

Brain imaging analysis is fundamental in neuroscience, providing valuable insights into brain structure and function. Traditional workflows follow a sequential pipeline-brain extraction, registration, segmentation, parcellation, network…

Image and Video Processing · Electrical Eng. & Systems 2025-02-27 Yao Su , Keqi Han , Mingjie Zeng , Lichao Sun , Liang Zhan , Carl Yang , Lifang He , Xiangnan Kong

Deciphering visual content from functional Magnetic Resonance Imaging (fMRI) helps illuminate the human vision system. However, the scarcity of fMRI data and noise hamper brain decoding model performance. Previous approaches primarily…

Computer Vision and Pattern Recognition · Computer Science 2024-06-14 Yulong Liu , Yongqiang Ma , Guibo Zhu , Haodong Jing , Nanning Zheng

There has been much interest in deploying deep learning algorithms on low-powered devices, including smartphones, drones, and medical sensors. However, full-scale deep neural networks are often too resource-intensive in terms of energy and…

Computer Vision and Pattern Recognition · Computer Science 2022-09-20 Yoshitomo Matsubara , Ruihan Yang , Marco Levorato , Stephan Mandt

The real-time assessment of complex motor skills presents a challenge in fields such as surgical training and rehabilitation. Recent advancements in neuroimaging, particularly functional near-infrared spectroscopy (fNIRS), have enabled…

Signal Processing · Electrical Eng. & Systems 2025-04-08 Aseem Subedi , Rahul , Lora Cavuoto , Steven Schwaitzberg , Matthew Hackett , Jack Norfleet , Suvranu De

Motivated by the recent success of end-to-end deep neural models for ranking tasks, we present here a supervised end-to-end neural approach for query performance prediction (QPP). In contrast to unsupervised approaches that rely on various…

Information Retrieval · Computer Science 2022-02-16 Suchana Datta , Debasis Ganguly , Derek Greene , Mandar Mitra

Purpose: Conventional automated segmentation of the head anatomy in MRI distinguishes different brain and non-brain tissues based on image intensities and prior tissue probability maps (TPM). This works well for normal head anatomies, but…

Image and Video Processing · Electrical Eng. & Systems 2021-05-20 Lukas Hirsch , Yu Huang , Lucas C Parra

Segmenting a structural magnetic resonance imaging (MRI) scan is an important pre-processing step for analytic procedures and subsequent inferences about longitudinal tissue changes. Manual segmentation defines the current gold standard in…

Computer Vision and Pattern Recognition · Computer Science 2017-06-07 Alex Fedorov , Jeremy Johnson , Eswar Damaraju , Alexei Ozerin , Vince Calhoun , Sergey Plis

3D object recognition has seen significant advances in recent years, showing impressive performance on real-world 3D scan benchmarks, but lacking in object part reasoning, which is fundamental to higher-level scene understanding such as…

Computer Vision and Pattern Recognition · Computer Science 2023-03-28 Alexey Bokhovkin , Angela Dai

Brain motor decoding aims to interpret and translate neural activity into behaviors. Decoding models should generalize across variations, such as recordings from different brain sites, experimental sessions, behavior types, and subjects,…

Machine Learning · Computer Science 2026-04-03 Hao Fang , Ryan A. Canfield , Tomohiro Ouchi , Beatrice Macagno , Eli Shlizerman , Amy L. Orsborn

We present a cross-modality generation framework that learns to generate translated modalities from given modalities in MR images without real acquisition. Our proposed method performs NeuroImage-to-NeuroImage translation (abbreviated as…

Computer Vision and Pattern Recognition · Computer Science 2018-09-12 Qianye Yang , Nannan Li , Zixu Zhao , Xingyu Fan , Eric I-Chao Chang , Yan Xu

The task of medical image segmentation commonly involves an image reconstruction step to convert acquired raw data to images before any analysis. However, noises, artifacts and loss of information due to the reconstruction process are…

Computer Vision and Pattern Recognition · Computer Science 2019-07-23 Qiaoying Huang , Xiao Chen , Dimitris Metaxas , Mariappan S. Nadar

Skullstripping is defined as the task of segmenting brain tissue from a full head magnetic resonance image~(MRI). It is a critical component in neuroimage processing pipelines. Downstream deformable registration and whole brain segmentation…

Computer Vision and Pattern Recognition · Computer Science 2019-04-30 Amod Jog , P. Ellen Grant , Joseph L. Jacobson , Andre van der Kouwe , Ernesta M. Meintjes , Bruce Fischl , Lilla Zöllei

For unsupervised pretraining, mask-reconstruction pretraining (MRP) approaches, e.g. MAE and data2vec, randomly mask input patches and then reconstruct the pixels or semantic features of these masked patches via an auto-encoder. Then for a…

Machine Learning · Computer Science 2023-02-14 Jiachun Pan , Pan Zhou , Shuicheng Yan

Magnetic resonance imaging (MRI) data is heterogeneous due to differences in device manufacturers, scanning protocols, and inter-subject variability. A conventional way to mitigate MR image heterogeneity is to apply preprocessing…

Image and Video Processing · Electrical Eng. & Systems 2023-10-24 Ekaterina Kondrateva , Polina Druzhinina , Alexandra Dalechina , Svetlana Zolotova , Andrey Golanov , Boris Shirokikh , Mikhail Belyaev , Anvar Kurmukov

Deep learning has emerged as a promising approach for learning the nonlinear mapping between diffusion-weighted MR images and tissue parameters, which enables automatic and deep understanding of the brain microstructures. However, the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-21 Wenxin Fan , Jian Cheng , Qiyuan Tian , Ruoyou Wu , Juan Zou , Zan Chen , Shanshan Wang

We present Neural Correspondence Prior (NCP), a new paradigm for computing correspondences between 3D shapes. Our approach is fully unsupervised and can lead to high-quality correspondences even in challenging cases such as sparse point…

Computer Vision and Pattern Recognition · Computer Science 2023-03-28 Souhaib Attaiki , Maks Ovsjanikov

Transfer learning has fundamentally changed the landscape of natural language processing (NLP) research. Many existing state-of-the-art models are first pre-trained on a large text corpus and then fine-tuned on downstream tasks. However,…

Computation and Language · Computer Science 2021-09-10 Haoming Jiang , Pengcheng He , Weizhu Chen , Xiaodong Liu , Jianfeng Gao , Tuo Zhao

Neural network calibration is an essential task in deep learning to ensure consistency between the confidence of model prediction and the true correctness likelihood. In this paper, we propose a new post-processing calibration method called…

Machine Learning · Computer Science 2024-07-26 Yung-Chen Tang , Pin-Yu Chen , Tsung-Yi Ho

Prompt learning is an effective method to customize Vision-Language Models (VLMs) for various downstream tasks, involving tuning very few parameters of input prompt tokens. Recently, prompt pretraining in large-scale dataset (e.g.,…

Computer Vision and Pattern Recognition · Computer Science 2024-09-11 Zhenyuan Chen , Lingfeng Yang , Shuo Chen , Zhaowei Chen , Jiajun Liang , Xiang Li
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