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In this paper we present a mathematical model for the electrochemical deposition aimed at the production of inverse opals. The real system consists of an arrangement of sub micrometer spheres, through which the species in an electrolytic…

Chemical Physics · Physics 2013-06-25 P. C. T. D'Ajello , L. Lauck , G. L. Nunes

A parameterization strategy for molecular models on the basis of force fields is proposed, which allows a rapid development of models for small molecules by using results from quantum mechanical (QM) ab initio calculations and thermodynamic…

Chemical Physics · Physics 2009-04-22 Bernhard Eckl , Jadran Vrabec , Hans Hasse

Heavy and light particles are commonly found in many natural phenomena and industrial processes, such as suspensions of bubbles, dust, and droplets in incompressible turbulent flows. Based on a recent machine learning approach using a…

Fluid Dynamics · Physics 2024-06-10 Tianyi Li , Samuele Tommasi , Michele Buzzicotti , Fabio Bonaccorso , Luca Biferale

In this paper, starting from the microscopic dynamics of isolated dislocations, we explain how to derive formally mean field models for the dynamics of dislocation densities. Essentially these models are tranport equations, coupled with the…

Mathematical Physics · Physics 2009-01-16 Ahmad El Hajj , H. Ibrahim , Régis Monneau

We analyze a macroscopic model with a maximal density constraint which describes short range repulsion in biological systems. This system aims at modeling finite-size particles which cannot overlap and repel each other when they are too…

Mathematical Physics · Physics 2014-04-08 Pierre Degond , Laurent Navoret , Richard Bon , David Sanchez

Models for the transport of high energy charged particles through strong magnetic turbulence play a key role in space and astrophysical studies, such as describing the propagation of solar energetic particles and high energy cosmic rays.…

We derive hydrodynamics of a prototypical one dimensional model, having variable-range hopping, which mimics passive diffusion and ballistic motion of active, or self-propelled, particles. The model has two main ingredients - the hardcore…

Statistical Mechanics · Physics 2020-05-27 Tanmoy Chakraborty , Subhadip Chakraborti , Arghya Das , Punyabrata Pradhan

Diffusion probabilistic models have made their way into a number of high-profile applications since their inception. In particular, there has been a wave of research into using diffusion models in the prediction and design of biomolecular…

Biomolecules · Quantitative Biology 2024-06-05 Trevor Norton , Debswapna Bhattacharya

In traffic flow, self-organized wave propagation, which characterizes congestion, has been reproduced in macroscopic and microscopic models. Hydrodynamic models, a subset of macroscopic models, can be derived from microscopic-level…

Dynamical Systems · Mathematics 2024-06-21 Kota Ikeda , Toru Kan , Toshiyuki Ogawa

Modeling biological processes is a highly demanding task because not all processes are fully understood. Mathematical models allow us to test hypotheses about possible mechanisms of biological processes. The mathematical mechanisms…

Numerical Analysis · Mathematics 2023-12-11 Cordula Reisch , Hannah Burmester

We consider several multiscale-in-time kinetic Monte Carlo models, in which some variables evolve on a fast time scale, while the others evolve on a slow time scale. In the first two models we consider, a particle evolves in a…

Probability · Mathematics 2015-06-12 Salma Lahbabi , Frederic Legoll

New model equations are derived for dynamics of self-aggregation of finite-size particles. Differences from standard Debye-Huckel and Keller-Segel models are: the mobility of particles depends on the configuration of their neighbors and…

Pattern Formation and Solitons · Physics 2009-11-11 Darryl D. Holm , Vakhtang Putkaradze

We consider deep multivariate models for heterogeneous collections of random variables. In the context of computer vision, such collections may e.g. consist of images, segmentations, image attributes, and latent variables. When developing…

Machine Learning · Computer Science 2026-02-03 Dmitrij Schlesinger , Boris Flach , Alexander Shekhovtsov

In recent work [1] we uncovered intriguing connections between Otto's characterisation of diffusion as entropic gradient flow [16] on one hand and large-deviation principles describing the microscopic picture (Brownian motion) on the other.…

Analysis of PDEs · Mathematics 2014-03-05 Stefan Adams , Nicolas Dirr , Mark A. Peletier , Johannes Zimmer

In this paper, we derive a kinetic description of swarming particle dynamics in an interacting multi-agent system featuring emerging leaders and followers. Agents are classically characterized by their position and velocity plus a…

Mathematical Physics · Physics 2024-09-30 Emiliano Cristiani , Nadia Loy , Marta Menci , Andrea Tosin

Diffusion models have become a powerful family of deep generative models, with record-breaking performance in many applications. This paper first gives an overview and derivation of the basic theory of diffusion models, then reviews the…

Computation and Language · Computer Science 2023-03-15 Yuansong Zhu , Yu Zhao

This paper introduces a novel data driven framework for constructing accurate and general equivariant models of multiscale phenomena which does not rely on specific assumptions about the underlying physics. This framework is illustrated…

Fluid Dynamics · Physics 2026-04-15 Brandon Choi , Matteo Ugliotti , Mateo Reynoso , Daniel R. Gurevich , Roman O. Grigoriev

Natural phenomena frequently involve a very large number of interacting molecules moving in confined regions of space. Cellular transport by motor proteins is an example of such collective behavior. We derive a deterministic compartmental…

Subcellular Processes · Quantitative Biology 2017-11-01 Yoram Zarai , Michael Margaliot , Anatoly B. Kolomeisky

The imbalanced Hubbard model features a transition between dynamic regimes depending on the mass ratio and coupling strength between two different particle species. A slowdown of the lighter particle transport can be attributed to an…

Statistical Mechanics · Physics 2025-07-23 Mirko Daumann , Thomas Dahm

A continuum model for a population of self-propelled particles interacting through nematic alignment is derived from an individual-based model. The methodology consists of introducing a hydrodynamic scaling of the corresponding mean-field…

Analysis of PDEs · Mathematics 2015-09-11 Pierre Degond , Angelika Manhart , Hui Yu
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