Related papers: On the Maximal Independent Sets of $k$-mers with t…
The goal of this paper is to understand the complexity of symmetry breaking problems, specifically maximal independent set (MIS) and the closely related $\beta$-ruling set problem, in two computational models suited for large-scale graph…
Given a graph, a maximal independent set (MIS) is a maximal subset of pairwise non-adjacent vertices. Finding an MIS is a fundamental problem in distributed computing. Although the problem is extensively studied and well understood in…
The extraction of $k$-mers is a fundamental component in many complex analyses of large next-generation sequencing datasets, including reads classification in genomics and the characterization of RNA-seq datasets. The extraction of all…
Background: Short sequence substrings of a fixed length k, called k-mers, are a ubiquitous computational primitive in bioinformatics, used across sequence indexing, read mapping, genome assembly, metagenomic classification, and comparative…
Finding a maximal independent set (MIS) in a graph is a cornerstone task in distributed computing. The local nature of an MIS allows for fast solutions in a static distributed setting, which are logarithmic in the number of nodes or in…
We consider the classic maximal and maximum independent set problems in three models of graph streams: In the edge-arrival model we see a stream of edges which collectively define a graph, this model has been well-studied for a variety of…
This work deals with the Maximum Independent Set ($\mathcal{MIS}$) formation problem in a finite rectangular grid by autonomous robots. Suppose we are given a set of identical robots, where each robot is placed on a node of a finite…
The maximal independent set (MIS) is one of the most fundamental problems in distributed computing, and it has been studied intensively for over four decades. This paper focuses on the MIS problem in the Radio Network model, a standard…
Most graphs in real life keep changing with time. These changes can be in the form of insertion or deletion of edges or vertices. Such rapidly changing graphs motivate us to study dynamic graph algorithms. However, three important graph…
The maximum independent set (MIS) problem of graph theory using the quantum alternating operator ansatz is studied. We perform simulations on the Rigetti Forest simulator for the square ring, $K_{2,3}$, and $K_{3,3}$ graphs and analyze the…
The learning of mixture models can be viewed as a clustering problem. Indeed, given data samples independently generated from a mixture of distributions, we often would like to find the {\it correct target clustering} of the samples…
We study the problem of finding a maximal independent set (MIS) in the standard LOCAL model of distributed computing. Classical algorithms by Luby [JACM'86] and Alon, Babai, and Itai [JALG'86] find an MIS in $O(\log n)$ rounds in $n$-node…
We show that the maximum independent set problem (MIS) on an $n$-vertex graph can be solved in $1.1996^nn^{O(1)}$ time and polynomial space, which even is faster than Robson's $1.2109^{n}n^{O(1)}$-time exponential-space algorithm published…
Edit distance is an important measure of string similarity. It counts the number of insertions, deletions and substitutions one has to make to a string $x$ to get a string $y$. In this paper we design an almost linear-size sketching scheme…
In this paper, we investigate a distributed maximal independent set (MIS) reconfiguration problem, in which there are two maximal independent sets for which every node is given its membership status, and the nodes need to communicate with…
The Maximal Independent Set (MIS) problem is one of the basics in the study of locality in distributed graph algorithms. This paper presents an extremely simple randomized algorithm providing a near-optimal local complexity for this…
We study the Maximum Independent Set of Rectangles (MISR) problem: given a set of $n$ axis-parallel rectangles, find a largest-cardinality subset of the rectangles, such that no two of them overlap. MISR is a basic geometric optimization…
We study a natural extension of the Maximum Weight Independent Set Problem (MWIS), one of the most studied optimization problems in Graph algorithms. We are given a graph $G=(V,E)$, a weight function $w: V \rightarrow \mathbb{R^+}$, a…
Similarity search based on a distance function in metric spaces is a fundamental problem for many applications. Queries for similar objects lead to the well-known machine learning task of nearest-neighbours identification. Many data…
Nielsen proved that the maximum number of maximal independent sets (MIS's) of size $k$ in an $n$-vertex graph is asymptotic to $(n/k)^k$, with the extremal construction a disjoint union of $k$ cliques with sizes as close to $n/k$ as…