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Motivation: Building and iterating machine learning models is often a resource-intensive process. In biomedical research, scientific codebases can lack scalability and are not easily transferable to work beyond what they were intended.…

Machine Learning · Computer Science 2025-04-03 Khoa A. Tran , John V. Pearson , Nicola Waddell

The rapid expansion of the open-source language model landscape presents an opportunity to merge the competencies of these model checkpoints by combining their parameters. Advances in transfer learning, the process of fine-tuning pretrained…

Computation and Language · Computer Science 2025-01-13 Charles Goddard , Shamane Siriwardhana , Malikeh Ehghaghi , Luke Meyers , Vlad Karpukhin , Brian Benedict , Mark McQuade , Jacob Solawetz

Continuous integration is a software engineering practice of frequently merging all developer working copies with a shared main branch, e.g., several times a day. With the advent of GitHub, a platform well known for its "social coding"…

Software Engineering · Computer Science 2015-12-08 Bogdan Vasilescu , Stef van Schuylenburg , Jules Wulms , Alexander Serebrenik , Mark G. J. van den Brand

Large language models (LLMs) have gained popularity in various fields for their exceptional capability of generating human-like text. Their potential misuse has raised social concerns about plagiarism in academic contexts. However,…

Human-Computer Interaction · Computer Science 2023-06-02 Luoxuan Weng , Minfeng Zhu , Kam Kwai Wong , Shi Liu , Jiashun Sun , Hang Zhu , Dongming Han , Wei Chen

This paper presents Graph-of-Thought (GoT), a new model for workflow automation that enhances the flexibility and efficiency of Large Language Models (LLMs) in complex task execution. GoT advances beyond traditional linear and tree-like…

Artificial Intelligence · Computer Science 2024-02-20 Ye Li

Large language models (LLMs) have increased the demand for personalized and stylish content generation. However, closed-source models like GPT-4 present limitations in optimization opportunities, while the substantial training costs and…

Computation and Language · Computer Science 2024-10-07 Chenning Xu , Fangxun Shu , Dian Jin , Jinghao Wei , Hao Jiang

GitHub natively supports workflow automation through GitHub Actions. Yet, workflow maintenance is often considered a burden for software developers, who frequently face difficulties in writing, testing, debugging, and maintaining workflows.…

Software Engineering · Computer Science 2026-04-13 Hassan Onsori Delicheh , Guillaume Cardoen , Alexandre Decan , Tom Mens

The work described in this paper is a contribution to the problems of managing in data-intensive scientific applications. First, we discuss scientific workflows and motivate there use in scientific applications. Then, we introduce the…

Networking and Internet Architecture · Computer Science 2007-05-23 Khaled Gaaloul , François Charoy , Claude Godart

This paper introduces the Creative Intelligence Loop (CIL), a novel socio-technical framework for responsible human-AI co-creation. Rooted in the 'Workflow as Medium' paradigm, the CIL proposes a disciplined structure for dynamic human-AI…

Computers and Society · Computer Science 2025-11-25 Lee Ackerman

Contemporary development projects benefit from code review as it improves the quality of a project. Large ecosystems of inter-dependent projects like OpenStack generate a large number of reviews, which poses new challenges for collaboration…

Software Engineering · Computer Science 2023-02-15 Dong Wang , Patanamon Thongtanunam , Raula Gaikovina Kula , Kenichi Matsumoto

Large Language Models (LLMs) produce eloquent texts but often the content they generate needs to be verified. Traditional information retrieval systems can assist with this task, but most systems have not been designed with LLM-generated…

Human-Computer Interaction · Computer Science 2024-08-28 Yingqiang Gao , Jhony Prada , Nianlong Gu , Jessica Lam , Richard H. R. Hahnloser

Large language models (LLMs) have gained significant attention in various fields but prone to hallucination, especially in knowledge-intensive (KI) tasks. To address this, retrieval-augmented generation (RAG) has emerged as a popular…

Computation and Language · Computer Science 2024-04-23 Xiaoxi Li , Zhicheng Dou , Yujia Zhou , Fangchao Liu

Science progresses by building upon the prior body of knowledge documented in scientific publications. The acceleration of research makes it hard to stay up-to-date with the recent developments and to summarize the ever-growing body of…

Computation and Language · Computer Science 2023-11-07 Martin Funkquist , Ilia Kuznetsov , Yufang Hou , Iryna Gurevych

In order to effectively prepare the next generation of IT professionals and systems analysts, it is important to incorporate cloud based online collaboration tools into the coursework for developing the students' cooperative skills as well…

Computers and Society · Computer Science 2016-03-10 Emre Erturk

Existing recommendation systems can help developers improve their software development abilities by recommending new programming tools, such as a refactoring tool or a program navigation tool. However, simply recommending tools in isolation…

Software Engineering · Computer Science 2021-02-09 Dylan Bates

Modern software systems require code that is not only functional but also maintainable and well-structured. Although Large Language Models (LLMs) are increasingly used to automate software development, most studies focus on isolated,…

Software Engineering · Computer Science 2025-11-14 Wasique Islam Shafin , Md Nakhla Rafi , Zhenhao Li , Tse-Hsun Chen

Progress in science is deeply bound to the effective use of high-performance computing infrastructures and to the efficient extraction of knowledge from vast amounts of data. Such data comes from different sources that follow a cycle…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-15 Rosa M Badia , Jorge Ejarque , Francesc Lordan , Daniele Lezzi , Javier Conejero , Javier Álvarez Cid-Fuentes , Yolanda Becerra , Anna Queralt

When designing multidisciplinary tool workflows in visual development environments, researchers and engineers often combine simulation tools which serve a functional purpose and helper tools that merely ensure technical compatibility by,…

Software Engineering · Computer Science 2021-12-01 Dominik Schneider , Alexander Weinert

In a new effort to make our research transparent and reproducible by others, we developed a workflow to run and share computational studies on the public cloud Microsoft Azure. It uses Docker containers to create an image of the application…

Computational Engineering, Finance, and Science · Computer Science 2020-07-24 Olivier Mesnard , Lorena A. Barba

Collaborative Qualitative Analysis (CQA) can enhance qualitative analysis rigor and depth by incorporating varied viewpoints. Nevertheless, ensuring a rigorous CQA procedure itself can be both demanding and costly. To lower this bar, we…

Human-Computer Interaction · Computer Science 2024-01-23 Jie Gao , Yuchen Guo , Gionnieve Lim , Tianqin Zhang , Zheng Zhang , Toby Jia-Jun Li , Simon Tangi Perrault
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