English
Related papers

Related papers: Unwrapping NPT simulations to calculate diffusion …

200 papers

A recently proposed method for computer simulations in the isothermal-isobaric (NPT) ensemble, based on Langevin-type equations of motion for the particle coordinates and the ``piston'' degree of freedom, is re-derived by straightforward…

Soft Condensed Matter · Physics 2016-08-31 A. Kolb , B. Duenweg

We study the transport of high-energy particles in pulsar wind nebulae (PWN) using three-dimensional MHD (see Porth et al. (2014) for details) and test-particle simulations, as well as a Fokker-Planck particle transport model. The latter…

High Energy Astrophysical Phenomena · Physics 2016-07-27 O. Porth , M. J. Vorster , M. Lyutikov , N. E. Engelbrecht

In many systems, the time scales of the microscopic dynamics and macroscopic dynamics of interest are separated by many orders of magnitude. Examples abound, for instance nucleation, protein folding, and chemical reactions. For these…

Other Condensed Matter · Physics 2009-11-13 J. Kuipers , G. T. Barkema

The diffusion properties of self-propelled particles which move at constant speed and, in addition, reverse their direction of motion repeatedly are investigated. The internal dynamics of particles triggering these reversal processes is…

Biological Physics · Physics 2016-05-30 Robert Großmann , Fernando Peruani , Markus Bär

We investigate the transport properties of active particles undergoing a three-state run-and-tumble dynamics in one dimension, induced by non-reciprocal transition rates between self-propelling velocity states $\{-v, 0, +v\}$ that…

Statistical Mechanics · Physics 2025-08-15 Julio C. R. Romo-Cruz , Francisco J. Sevilla

We assume that we observe $N$ independent copies of a diffusion process on a time-interval $[0,2T]$. For a given time $t$, we estimate the transition density $p_t(x,y)$, namely the conditional density of $X_{t + s}$ given $X_s = x$, under…

Statistics Theory · Mathematics 2025-05-01 Fabienne Comte , Nicolas Marie

Lie group methods are applied to the time-dependent, monoenergetic neutron diffusion equation in materials with spatial and time dependence. To accomplish this objective, the underlying 2nd order partial differential equation (PDE) is…

Analysis of PDEs · Mathematics 2019-03-21 Jesse F. Giron , Scott D. Ramsey , Brian A. Temple

We present the results of a numerical investigation of charged-particle transport across a synthesized magnetic configuration composed of a constant homogeneous background field and a multiscale perturbation component simulating an effect…

Statistical Mechanics · Physics 2007-05-23 Francesco Chiaravalloti , Alexander V. Milovanov , Gaetano Zimbardo

Excluded-volume effects can play an important role in determining transport properties in diffusion of particles. Here, the diffusion of finite-sized hard-core interacting particles in two or three dimensions is considered systematically…

Analysis of PDEs · Mathematics 2012-01-06 Maria Bruna , S. Jonathan Chapman

The diffusive transport of biased Brownian particles in a two-dimensional symmetric channel is investigated numerically considering both the no-flow and the reflection boundary conditions at the channel boundaries. Here, the geometrical…

Soft Condensed Matter · Physics 2019-09-10 Narender Khatri , P. S. Burada

We present a method to probe molecular and nanoparticle diffusion within thin, solvated polymer coatings. The device exploits the confinement with well-defined geometry that forms at the interface between a planar and a hemi-spherical…

In this paper, we extend the unified kinetic particle (UGKP) method to the frequency-dependent radiative transfer equation with both absorption-emission and scattering processes. The extended UGKP method could not only capture the diffusion…

Computational Physics · Physics 2023-02-17 Yuan Hu , Chang Liu

Astrophysical observations originate from matter that interacts with radiation or transported particles. We develop a pragmatic approximation in order to enable multi-dimensional simulations with basic spectral radiative transfer when the…

Astrophysics · Physics 2009-06-23 M. Liebendoerfer , S. C. Whitehouse , T. Fischer

The unified gas-kinetic wave-particle (UGKWP) method is proposed for the neutron transport equation, addressing the inherent multiscale nature of neutron propagation in both optically thin and thick regimes. UGKWP couples macroscopic…

Numerical Analysis · Mathematics 2025-09-15 Guangwei Liu , Shuang Tan , Yanli Wang

We present a general framework to study the distribution of the flux through the origin up to time $t$, in a non-interacting one-dimensional system of particles with a step initial condition with a fixed density $\rho$ of particles to the…

Statistical Mechanics · Physics 2020-05-06 Tirthankar Banerjee , Satya N. Majumdar , Alberto Rosso , Gregory Schehr

We present a method to sample reactive pathways via biased molecular dynamics simulations in trajectory space. We show that the use of enhanced sampling techniques enables unconstrained exploration of multiple reaction routes. Time…

Computational Physics · Physics 2020-07-15 Davide Mandelli , Barak Hirshberg , Michele Parrinello

We investigate the Brownian diffusion of particles in one spatial dimension and in the presence of finite regions within which particles can either evaporate or be reset to a given location. For open boundary conditions, we highlight the…

Statistical Mechanics · Physics 2020-11-04 Gennaro Tucci , Andrea Gambassi , Shamik Gupta , Édgar Roldán

Diffusion-induced Ramsey narrowing that appears when atoms can leave the interaction region and repeatedly return without lost of coherence is investigated using strong collisions approximation. The effective diffusion equation is obtained…

Quantum Physics · Physics 2008-01-23 Alexander Romanenko , Leonid Yatsenko

Phase wrapping is a major problem in direction-of-arrival (DOA) estimation using phase-difference observations. For a sensor pair with an inter-sensor spacing greater than half of the wavelength ($\lambda/2$) of the signal, phase wrapping…

Signal Processing · Electrical Eng. & Systems 2021-10-22 Hui Chen , Tarig Ballal , Tareq Y. Al-Naffouri

Correct prediction of particle transport by surface waves is crucial in many practical applications such as search and rescue or salvage operations and pollution tracking and clean-up efforts. Recent results have indicated transport by…

Fluid Dynamics · Physics 2023-01-26 D. Eeltink , R. Calvert , J. E. Swagemakers , Qian Xiao , T. S. van den Bremer