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General sparse matrix-matrix multiplication (SpGEMM) is a fundamental building block for numerous applications such as algebraic multigrid method (AMG), breadth first search and shortest path problem. Compared to other sparse BLAS routines,…

Mathematical Software · Computer Science 2015-09-15 Weifeng Liu , Brian Vinter

We show that using the multi-splitting algorithm as a preconditioner for the domain wall Dirac linear operator, arising in lattice QCD, effectively reduces the inter-node communication cost, at the expense of performing more on-node…

High Energy Physics - Lattice · Physics 2021-09-09 Jiqun Tu , M. A. Clark , Chulwoo Jung , Robert Mawhinney

We propose a generic algorithmic building block to accelerate training of machine learning models on heterogeneous compute systems. Our scheme allows to efficiently employ compute accelerators such as GPUs and FPGAs for the training of…

Machine Learning · Computer Science 2017-11-08 Celestine Dünner , Thomas Parnell , Martin Jaggi

Graph foundation models have demonstrated remarkable adaptability across diverse downstream tasks through large-scale pretraining on graphs. However, existing implementations of the backbone model, graph transformers, are typically limited…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-21 Jun-Liang Lin , Kamesh Madduri , Mahmut Taylan Kandemir

Generalized sparse matrix-matrix multiplication is a key primitive for many high performance graph algorithms as well as some linear solvers such as multigrid. We present the first parallel algorithms that achieve increasing speedups for an…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-08-09 Aydın Buluç , John R. Gilbert

Randomized methods are becoming increasingly popular in numerical linear algebra. However, few attempts have been made to use them in developing preconditioners. Our interest lies in solving large-scale sparse symmetric positive definite…

Numerical Analysis · Mathematics 2021-11-16 Hussam Al Daas , Tyrone Rees , Jennifer Scott

We study exact sparse linear regression with an $\ell_0-\ell_2$ penalty and develop a branch-and-bound (BnB) algorithm explicitly designed for GPU execution. Starting from a perspective reformulation, we derive an interval relaxation that…

Optimization and Control · Mathematics 2026-02-05 Xiang Meng , Ryan Lucas , Rahul Mazumder

The hierarchical interpolative factorization for elliptic partial differential equations is a fast algorithm for approximate sparse matrix inversion in linear or quasilinear time. Its accuracy can degrade, however, when applied to strongly…

Numerical Analysis · Mathematics 2019-04-09 Jordi Feliu-Fabà , Kenneth L. Ho , Lexing Ying

We present a fast randomized algorithm that computes a low rank LU decomposition. Our algorithm uses random projections type techniques to efficiently compute a low rank approximation of large matrices. The randomized LU algorithm can be…

Numerical Analysis · Mathematics 2016-02-02 Gil Shabat , Yaniv Shmueli , Yariv Aizenbud , Amir Averbuch

Multistep matrix splitting iterations serve as preconditioning for Krylov subspace methods for solving singular linear systems. The preconditioner is applied to the generalized minimal residual (GMRES) method and the flexible GMRES (FGMRES)…

Numerical Analysis · Mathematics 2021-11-09 Keiichi Morikuni

We present a block lower triangular (BLT) preconditioner to accelerate the convergence of nthe Krylov subspace iterative methods, such as generalized minimal residual (GMRES), for solving a broad class of complex symmetric system of linear…

Numerical Analysis · Mathematics 2016-11-14 Davod Khojasteh Salkuyeh , Tahereh Salimi Siahkalaei

The paper describes a sparse direct solver for the linear systems that arise from the discretization of an elliptic PDE on a two dimensional domain. The scheme decomposes the domain into thin subdomains, or ``slabs'' and uses a two-level…

Numerical Analysis · Mathematics 2025-09-01 Anna Yesypenko , Per-Gunnar Martinsson

Phase-field fracture models lead to variational problems that can be written as a coupled variational equality and inequality system. Numerically, such problems can be treated with Galerkin finite elements and primal-dual active set…

Numerical Analysis · Mathematics 2020-05-04 Daniel Jodlbauer , Ulrich Langer , Thomas Wick

This paper presents a Graphics Processing Units (GPUs) acceleration method of an iterative scheme for gas-kinetic model equations. Unlike the previous GPU parallelization of explicit kinetic schemes, this work features a fast converging…

Computational Physics · Physics 2020-01-08 Lianhua Zhu , Peng Wang , Songze Chen , Zhaoli Guo , Yonghao Zhang

We present an alternative GPU acceleration for plane waves pseudopotentials electronic structure codes designed for systems that have small unit cells but require a large number of k points to sample the Brillouin zone as happens, for…

Materials Science · Physics 2025-07-31 Xuejun Gong , Andrea Dal Corso

This paper introduces cuHALLaR, a GPU-accelerated implementation of the HALLaR method proposed in Monteiro et al. 2024 for solving large-scale semidefinite programming (SDP) problems. We demonstrate how our Julia-based implementation…

We present a recursive way to partition hypergraphs which creates and exploits hypergraph geometry and is suitable for many-core parallel architectures. Such partitionings are then used to bring sparse matrices in a recursive Bordered Block…

Data Structures and Algorithms · Computer Science 2011-05-24 B. O. Fagginger Auer , R. H. Bisseling

LLM-based applications have been widely used in various industries, but with the increasing of models size, an efficient large language model (LLM) inference system is an urgent problem to be solved for service providers. Since the…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-30 Xing Chen , Rong Shi , Lu Zhao , Lingbin Wang , Xiao Jin , Yueqiang Chen , Hongfeng Sun

Fast, scalable decoding architectures that operate in a block-wise parallel fashion across space and time are essential for real-time fault-tolerant quantum computing. We introduce a scalable AI-based pre-decoder for the surface code that…

Quantum Physics · Physics 2026-04-15 Christopher Chamberland , Jan Olle , Muyuan Li , Scott Thornton , Igor Baratta

In this article, a two-level overlapping domain decomposition preconditioner is developed for solving linear algebraic systems obtained from simulating Darcy flow in high-contrast media. Our preconditioner starts at a mixed finite element…

Numerical Analysis · Mathematics 2024-03-29 Changqing Ye , Shubin Fu , Eric T. Chung , Jizu Huang