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We explored the possible benefits of integrating quantum simulators in a "hybrid" quantum machine learning (QML) workflow that uses both classical and quantum computations in a high-performance computing (HPC) environment. Here, we used two…

Emerging Technologies · Computer Science 2024-07-11 Samuel T. Bieberich , Michael A. Sandoval

As hardware architectures are evolving in the push towards exascale, developing Computational Science and Engineering (CSE) applications depend on performance portable approaches for sustainable software development. This paper describes…

Massively parallel computing at the LHC could be the next leap necessary to reach an era of new discoveries at the LHC after the Higgs discovery. Scientific computing is a critical component of the LHC experiment, including operation,…

Computational Physics · Physics 2014-02-05 V. Halyo , P. LeGresley , P. Lujan

This living paper reviews the present High Performance Computing (HPC) capabilities of the Tinker-HP molecular modeling package. We focus here on the reference, double precision, massively parallel molecular dynamics engine present in…

Mathematical Software · Computer Science 2024-01-11 Luc-Henri Jolly , Alejandro Duran , Louis Lagardère , Jay W. Ponder , Pengyu Ren , Jean-Philip Piquemal

Maximizing parallelism level in applications can be achieved by minimizing overheads due to load imbalances and waiting time due to memory latencies. Compiler optimization is one of the most effective solutions to tackle this problem. The…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-29 Zahra Khatami , Hartmut Kaiser , J. Ramanujam

Automatically tuning parallel compute kernels allows libraries and frameworks to achieve performance on a wide range of hardware, however these techniques are typically focused on finding optimal kernel parameters for particular input sizes…

Performance · Computer Science 2020-09-01 John Lawson

Heterogeneous accelerator-centric compute clusters are emerging as efficient solutions for diverse AI workloads. However, current integration strategies often compromise data movement efficiency and encounter compatibility issues in…

Hardware Architecture · Computer Science 2025-08-21 Ryan Albert Antonio , Joren Dumoulin , Xiaoling Yi , Josse Van Delm , Yunhao Deng , Guilherme Paim , Marian Verhelst

We design and implement HPMC, a scalable hard particle Monte Carlo simulation toolkit, and release it open source as part of HOOMD-blue. HPMC runs in parallel on many CPUs and many GPUs using domain decomposition. We employ BVH trees…

Soft Condensed Matter · Physics 2016-06-22 Joshua A. Anderson , M. Eric Irrgang , Sharon C. Glotzer

Task-based programming models have become very popular, as they offer an attractive solution to parallelize serial application code with task and data annotations. They usually depend on a runtime system that schedules the tasks to multiple…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-06-15 Spyros Lyberis , Polyvios Pratikakis , Iakovos Mavroidis , Dimitrios S. Nikolopoulos

SISSO (sure-independence screening and sparsifying operator) is an artificial intelligence (AI) method based on symbolic regression and compressed sensing widely used in materials science research. SISSO++ is its C++ implementation that…

Performance · Computer Science 2025-02-28 Sebastian Eibl , Yi Yao , Matthias Scheffler , Markus Rampp , Luca M. Ghiringhelli , Thomas A. R. Purcell

Implementations of state-machine replication (SMR) prevalently use the variants of Paxos. Some of the recent variants of Paxos like, Ring Paxos, Multi-Ring Paxos, S-Paxos and HT-Paxos achieve significantly high throughput. However, to meet…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-07-16 Vinit Kumar , Ajay Agarwal

Datacenter servers are increasingly heterogeneous: from x86 host CPUs, to ARM or RISC-V CPUs in NICs/SSDs, to FPGAs. Previous works have demonstrated that migrating application execution at run-time across heterogeneous-ISA CPUs can yield…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-29 Edson Horta , Ho-Ren Chuang , Naarayanan Rao VSathish , Cesar Philippidis , Antonio Barbalace , Pierre Olivier , Binoy Ravindran

The cryosphere plays a significant role in Earth's climate system. Therefore, an accurate simulation of sea ice is of great importance to improve climate projections. To enable higher resolution simulations, graphics processing units (GPUs)…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-29 Robert Jendersie , Christian Lessig , Thomas Richter

Paxos is a prominent theory of state machine replication. Recent data intensive Systems those implement state machine replication generally require high throughput. Earlier versions of Paxos as few of them are classical Paxos, fast Paxos…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-07-07 Vinit Kumar , Ajay Agarwal

The vision of super computer at every desk can be realized by powerful and highly parallel CPUs or GPUs or APUs. Graphics processors once specialized for the graphics applications only, are now used for the highly computational intensive…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-04-16 Chittampally Vasanth Raja , Srinivas Balasubramanian , Prakash S Raghavendra

Particle-in-Cell (PIC) simulations are fundamental to plasma physics but often suffer from limited scalability due to particle-grid interaction bottlenecks and particle redistribution costs. Specifically, the particle-grid interaction…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-22 Yizhuo Rao , Xingjian Cui , Shangzhi Pang , Jiabin Xie , Guangnan Feng , Jinhui Wei , Ziyan Zhang , Languang Gao , Zhenyu Wang , Zhiguang Chen , Yutong Lu

The pervasive adoption of Deep Learning (DL) and Graph Processing (GP) makes it a de facto requirement to build large-scale clusters of heterogeneous accelerators including GPUs and FPGAs. The OpenCL programming framework can be used on the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-05-19 Yao Chen , Xin Long , Jiong He , Yuhang Chen , Hongshi Tan , Zhenxiang Zhang , Marianne Winslett , Deming Chen

Stochastic differential equations (SDEs) are widely used to model systems affected by random processes. In general, the analysis of an SDE model requires numerical solutions to be generated many times over multiple parameter combinations.…

Mathematical Software · Computer Science 2020-02-19 Eleftherios Avramidis , Marta Lalik , Ozgur E. Akman

For many years, systems running Nvidia-based GPU architectures have dominated the heterogeneous supercomputer landscape. However, recently GPU chipsets manufactured by Intel and AMD have cut into this market and can now be found in some of…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-18 L. Apanasevich , Yogesh Kale , Himanshu Sharma , Ana Marija Sokovic

GPUs are widely used to accelerate many important classes of workloads today. However, we observe that several important emerging classes of workloads, including simulation engines for deep reinforcement learning and dynamic neural…

Hardware Architecture · Computer Science 2024-01-24 Sankeerth Durvasula , Adrian Zhao , Raymond Kiguru , Yushi Guan , Zhonghan Chen , Nandita Vijaykumar