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We experimentally study energy transport in chains of trapped ions. We use a pulsed excitation scheme to rapidly add energy to the local motional mode of one of the ions in the chain. Subsequent energy readout allows us to determine how the…

Quantum Physics · Physics 2014-09-16 Michael Ramm , Thaned Pruttivarasin , Hartmut Häffner

In this paper, we present an algorithm that computes the topological signature for a given periodic motion sequence. Such signature consists of a vector obtained by persistent homology which captures the topological and geometric changes of…

Computer Vision and Pattern Recognition · Computer Science 2019-04-15 Javier Lamar-Leon , Rocio Gonzalez-Diaz , Edel Garcia-Reyes

The complex and dynamic crosstalk between tumour and immune cells results in tumours that can exhibit distinct qualitative behaviours - elimination, equilibrium, and escape - and intricate spatial patterns, yet share similar cell…

Persistent homology analysis provides means to capture the connectivity structure of data sets in various dimensions. On the mathematical level, by defining a metric between the objects that persistence attaches to data sets, we can…

Machine Learning · Computer Science 2019-06-12 Henri Riihimäki , José Licón-Saláiz

Granular materials exhibit intricate force networks, often concentrated in chains rather than being uniformly distributed. These meso-scale structures are complex to characterize, owing to their heterogeneous and anisotropic nature. We…

Soft Condensed Matter · Physics 2025-08-06 S Vishali , Abrar Naseer , Vijay Natarajan , Tejas G Murthy

We provide a phenomenological theory for topological transitions in restructuring networks. In this statistical mechanical approach energy is assigned to the different network topologies and temperature is used as a quantity referring to…

Statistical Mechanics · Physics 2016-08-31 Gergely Palla , Imre Derenyi , Illes Farkas , Tamas Vicsek

Ionic transport in conventional ionic solids is generally considered to proceed via independent diffusion events or "hops''. This assumption leads to well-known Arrhenius expressions for transport coefficients, and is equivalent to assuming…

Materials Science · Physics 2015-06-18 Benjamin J. Morgan , Paul A. Madden

We analyze the attosecond electron dynamics in hydrogen molecular ion driven by an external intense laser field using ab-initio numerical simulations of the corresponding time-dependent Schr{\"{o}}dinger equation and Bohmian trajectories.…

Chemical Physics · Physics 2015-05-20 Norio Takemoto , Andreas Becker

We investigate the effects of electronic correlations on the Bernevig-Hughes-Zhang model using the real-space density matrix renormalization group (DMRG) algorithm. We introduce a method to probe topological phase transitions in systems…

Strongly Correlated Electrons · Physics 2024-09-17 Rahul Soni , Harini Radhakrishnan , Bernd Rosenow , Gonzalo Alvarez , Adrian Del Maestro

Persistent homology is a cornerstone of topological data analysis, offering a multiscale summary of topology with robustness to nuisance transformations, such as rotations and small deformations. Persistent homology has seen broad use…

Methodology · Statistics 2025-11-19 Zitian Wu , Arkaprava Roy , Leo L. Duan

Complex systems are difficult to study not only because they are nonlinear, multiscale, and often nonstationary, but because their scientifically relevant organization is often invisible at the level of individual components, pairwise…

Physics and Society · Physics 2026-03-30 Mark M. Bailey

A small number of laser-cooled ions trapped in a linear radiofrequency multipole trap forms a hollow tube structure. We have studied, by means of molecular dynamics simulations, the structural transition from a double ring to a single ring…

Atomic Physics · Physics 2015-06-04 Mathieu Marciante , C. Champenois , Annette Calisti , Martina Knoop

Harnessing the quantum coherence and tunability of molecular-scale structures, we theoretically explore thermoelectric transport in ring-shaped molecular junctions featuring dimerized hopping integrals. By engineering alternating strong and…

Other Condensed Matter · Physics 2025-12-17 Ranjini Bhattacharya , Souvik Roy

We uncover the relationship of topology and disorder in a one-dimensional Su-Schrieffer-Heeger chain subjected to a slowly varying quasi-periodic modulation. By numerically calculating the disorder-averaged winding number and analytically…

Disordered Systems and Neural Networks · Physics 2022-07-20 Zhanpeng Lu , Zhihao Xu , Yunbo Zhang

Magnetotransport measurements on the centrosymetric square-net Eu(Ga$_{1-x}$Al$_x$)$_4$ compounds reveal evidence for both reciprocal- and real-space topology. For compositions $0.50 \leq x \leq 0.90$, several intermediate field phases are…

Materials Science · Physics 2023-02-08 Jaime M. Moya , Jianwei Huang , Shiming Lei , Kevin Allen , Yuxiang Gao , Yan Sun , Ming Yi , E. Morosan

Here we present a theory of ion aggregation and gelation of room temperature ionic liquids (RTILs). Based on it, we investigate the effect of ion aggregation on correlated ion transport - ionic conductivity and transference numbers -…

Neural systems can be modeled as networks of functionally connected neural elements. The resulting network can be analyzed using mathematical tools from network science and graph theory to quantify the system's topological organization and…

Neurons and Cognition · Quantitative Biology 2020-07-01 Richard F. Betzel , Katherine C. Wood , Christopher Angeloni , Maria Neimark Geffen , Danielle S. Bassett

Particle transport, acceleration and energisation are phenomena of major importance for both space and laboratory plasmas. Despite years of study, an accurate theoretical description of these effects is still lacking. Validating models with…

In this paper, we use topological data analysis techniques to construct a suitable neural network classifier for the task of learning sensor signals of entire power plants according to their reference designation system. We use…

Machine Learning · Computer Science 2026-03-24 Luciano Melodia , Richard Lenz

While it is well established that ionic conduction in lithium aluminosilicates proceeds via hopping of Li ions, the nature of the various hoping-based mechanisms in different temperature regimes has not been fully elucidated. The…

Materials Science · Physics 2018-03-22 Yachao Chen , Sukriti Manna , Cristian V. Ciobanu , Ivar E. Reimanis
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